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GEO accession:
Sample GSM3684
Query DataSets for GSM3684
Status
Public on Jun 14, 2003
Title
CD4+CD25+ activated
Sample type
SAGE
Anchor
NlaIII
Tag Count
19178
Tag Length
10
Source name
CD4+CD25+ spleen cells (CD3 X-linked)
Organism
Mus musculus
Extracted molecule
total RNA
Description
CD4+CD25+ spleen T cells were purified from naive CBA/Ca mice by MACS. These were activated overnight by solid phase anti-CD3.
cDNA was preamplified (SMART) before SAGE analysis.
Keywords = CD4, CD25, Treg, regulatory T cell, activation
Submission date
Jan 15, 2003
Last update date
Nov 19, 2008
Contact name
Steve Cobbold
E-mail(s)
stephen.cobbold@path.ox.ac.uk
Phone
+44-(0)1865-275504
Fax
+44-(0)1865-275501
URL
http://www.molbiol.ox.ac.uk/pathology/tig/welcome.html
Organization name
University of Oxford
Department
Sir William Dunn School of Pathology
Lab
Therapeutic Immunology Group
Street address
South Parks Road
City
Oxford
State/province
Oxfordshire
ZIP/Postal code
OX1 3RE
Country
United Kingdom
Platform ID
GPL11
Series (2)
GSE206
CD4/CD25 subsets of mouse spleen
GSE1316
IL-10-conditioned dendritic cells elicit innate inflammatory gene products in response to danger signals
Data table header descriptions
TAG
10 base pair SAGE Tag
COUNT
Absolute count of each Tag in library
TPM
tags per million
Data table
TAG
COUNT
TPM
GTGGCAGGGA
935
48753.78
GAAAATGAGA
890
46407.34
GAGGCACCCG
468
24402.96
TTCCTCCACC
407
21222.23
TCCAAATAGA
290
15121.49
GTAACAACGC
285
14860.78
CTGAGGCTGA
220
11471.48
GTGGCAGGAG
161
8395.04
CAATCAAAGG
118
6152.88
AACGAGGAAT
103
5370.74
GTGGCTCACA
93
4849.31
CAGCAGGAGG
91
4745.02
CTGTGATGCC
84
4380.02
CTTCTACCAA
82
4275.73
GGGAATAATT
76
3962.87
TGGTTGCTGG
71
3702.16
TGCGAAGGCC
69
3597.87
GCCTCTCCTT
66
3441.44
GCGTCTTCCT
60
3128.58
ATGTGCCCCA
54
2815.73
Total number of rows:
8482
Table truncated, full table size
159 Kbytes
.
Supplementary data files not provided
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