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Sample GSM3685 Query DataSets for GSM3685
Status Public on Jun 14, 2003
Title CD4+CD25neg activated
Sample type SAGE
Anchor NlaIII
Tag Count 21293
Tag Length 10
 
Source name CD4+CD25- spleen cells (CD3 X-linked)
Organism Mus musculus
Extracted molecule total RNA
 
Description CD4+CD25negative spleen cells were purified from naive CBA/Ca mice by MACS sorting. T cells were activated overnight by solid phase anti-CD3. cDNA was preamplified (SMART) before SAGE analysis.
 
Submission date Jan 15, 2003
Last update date Nov 19, 2008
Contact name Steve Cobbold
E-mail(s) stephen.cobbold@path.ox.ac.uk
Phone +44-(0)1865-275504
Fax +44-(0)1865-275501
URL http://www.molbiol.ox.ac.uk/pathology/tig/welcome.html
Organization name University of Oxford
Department Sir William Dunn School of Pathology
Lab Therapeutic Immunology Group
Street address South Parks Road
City Oxford
State/province Oxfordshire
ZIP/Postal code OX1 3RE
Country United Kingdom
 
Platform ID GPL11
Series (2)
GSE206 CD4/CD25 subsets of mouse spleen
GSE1316 IL-10-conditioned dendritic cells elicit innate inflammatory gene products in response to danger signals

Data table header descriptions
TAG 10 base pair SAGE Tag
COUNT Absolute count of each Tag in library
TPM tags per million

Data table
TAG COUNT TPM
GTGGCTCACA 682 32029.31
GTGACCACGG 340 15967.69
TGGTTGCTGG 265 12445.40
GATACTTGGA 254 11928.80
AACACTTGGA 243 11412.20
TTCCCAGAGT 198 9298.83
CCACGTGCCT 197 9251.87
AGAGCGAAGT 192 9017.05
AACGAGGAAT 185 8688.30
CCAGAGGCTG 170 7983.84
GCCACCGTCC 152 7138.50
AATGTCCGTC 145 6809.75
CGCCGCCGGC 140 6574.93
AATGGATGAA 133 6246.18
AAGATCAAGA 124 5823.51
CACAAACGGT 124 5823.51
CCCTGAGTCC 115 5400.84
ATACTGAAGC 110 5166.02
CAAGGTGACA 110 5166.02
CGCGTCACTA 109 5119.05

Total number of rows: 8207

Table truncated, full table size 153 Kbytes.




Supplementary data files not provided

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