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Status
Public on Mar 20, 2009
Title
SAGE_Vascular_normal_CS_control
Sample type
SAGE
Anchor
NlaIII
Tag Count
51642
Tag Length
10
Source name
vascular, normal, endothelium, non-normalized, short sage, short term culture
Organism
Homo sapiens
Characteristics
organ/tissue: vascular tissue preparation: short term culture sex: unknown cell type: endothelium
Biomaterial provider
Clonetics, San Diego, CA
Extracted molecule
total RNA
Extraction protocol
N/A
Description
CGAP_Numeric_library_ID: 29 Tagging_enzyme: BsmF I Old_library_name: SAGE_Duke_HMVEC Library_producer: Anita Lal Laboratory: Gregory Riggins, Duke University Medical Center References: A. Lal et al., Cancer Res 59, 5403-7 (1999) [PUBMED=10554005]
Submission date
Mar 19, 2009
Last update date
Mar 20, 2009
Contact name
Cancer Genome Anatomy Project CGAP
E-mail(s)
cgapbs-r@mail.nih.gov
Phone
301-496-1550
URL
http://cgap.nci.nih.gov/
Organization name
National Cancer Institute
Department
Cancer Genome Anatomy Project
Street address
City
Bethesda
State/province
MD
ZIP/Postal code
20852
Country
USA
Platform ID
GPL4
Series (2)
GSE14
Cancer Genome Anatomy Project (CGAP) SAGE Libraries
GSE15309
Cancer Genome Anatomy Project (CGAP) Human SAGE
Data table header descriptions
TAG
COUNT
TPM
tags per million
Data table
TAG
COUNT
TPM
AAAAAAAAAA
129
2497.97
AAAAAAAAAC
1
19.36
AAAAAAAAAG
4
77.46
AAAAAAAACC
1
19.36
AAAAAAAAGA
1
19.36
AAAAAAAAGG
1
19.36
AAAAAAACAA
1
19.36
AAAAAAACTA
1
19.36
AAAAAAAGAA
4
77.46
AAAAAAAGCC
1
19.36
AAAAAAATAA
1
19.36
AAAAAAATCA
1
19.36
AAAAAAATTT
1
19.36
AAAAAACACA
1
19.36
AAAAAACATT
2
38.73
AAAAAACCCA
1
19.36
AAAAAACCCT
1
19.36
AAAAAACTCC
4
77.46
AAAAAAGAAA
1
19.36
AAAAAAGATG
1
19.36
Total number of rows: 20562 Table truncated, full table size 383 Kbytes .Supplementary data files not provided