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Sample GSM386135 Query DataSets for GSM386135
Status Public on Jun 02, 2009
Title Universal Human Reference RNA amplified using the one cycle amplification kit from Affymetrix, 2 µg, rep2
Sample type RNA
 
Source name Universal Human Reference RNA
Organism Homo sapiens
Characteristics protocol: one cycle amplification kit from Affymetrix
Biomaterial provider Stratagene
Extracted molecule total RNA
Extraction protocol not applicable
Label biotin
Label protocol Biotinylated targets were prepared according to manufacturer's instructions (Affymetrix)
 
Hybridization protocol Hybridization mixture was prepared according to Affymetrix procedures
Scan protocol GeneChips were scanned using a 7G scanner (Affymetrix)
Description no additional information
Data processing MAS5.0
 
Submission date Mar 25, 2009
Last update date Aug 28, 2018
Contact name charles decraene
Organization name Institut Curie
Street address 26 rue d'ULM
City Paris
ZIP/Postal code 75248 cedex 05
Country France
 
Platform ID GPL570
Series (1)
GSE15398 Evaluation of methods for amplification of picogram amounts of total RNA for whole genome expression profiling
Relations
Reanalyzed by GSE119087

Data table header descriptions
ID_REF
VALUE done by mas5.0
ABS_CALL done by mas5.0
DETECTION P-VALUE done by mas5.0

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 211.295 P 0.000224668
AFFX-BioB-M_at 316.007 P 4.42873e-05
AFFX-BioB-3_at 183.54 P 7.00668e-05
AFFX-BioC-5_at 563.579 P 4.42873e-05
AFFX-BioC-3_at 602.425 P 5.16732e-05
AFFX-BioDn-5_at 1179.94 P 4.42873e-05
AFFX-BioDn-3_at 2449.97 P 4.42873e-05
AFFX-CreX-5_at 7975.83 P 5.16732e-05
AFFX-CreX-3_at 9941.17 P 4.42873e-05
AFFX-DapX-5_at 4.91344 A 0.712257
AFFX-DapX-M_at 4.90126 A 0.686292
AFFX-DapX-3_at 4.0446 A 0.81489
AFFX-LysX-5_at 2.64966 A 0.712307
AFFX-LysX-M_at 2.33125 A 0.760937
AFFX-LysX-3_at 12.1278 A 0.0780018
AFFX-PheX-5_at 1.10816 A 0.963431
AFFX-PheX-M_at 0.804575 A 0.984817
AFFX-PheX-3_at 7.38214 A 0.239063
AFFX-ThrX-5_at 5.45053 A 0.686277
AFFX-ThrX-M_at 14.9903 A 0.116113

Total number of rows: 54675

Table truncated, full table size 1641 Kbytes.




Supplementary file Size Download File type/resource
GSM386135.CEL.gz 7.6 Mb (ftp)(http) CEL
GSM386135.CHP.gz 487.1 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

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