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Sample GSM386147 Query DataSets for GSM386147
Status Public on Jun 02, 2009
Title Universal Human Reference RNA amplified using MessageAmp™ II aRNA Amplification (Ambion), 250 pg, rep1
Sample type RNA
 
Source name Universal Human Reference RNA
Organism Homo sapiens
Characteristics protocol: MessageAmp™ II aRNA Amplification (Ambion)
Biomaterial provider Stratagene
Extracted molecule total RNA
Extraction protocol not applicable
Label biotin
Label protocol Biotinylated targets were prepared according to manufacturer's instructions (Ambion)
 
Hybridization protocol Hybridization mixture was prepared according to Affymetrix procedures
Scan protocol GeneChips were scanned using a 7G scanner (Affymetrix)
Description no additional information
Data processing MAS5.0
 
Submission date Mar 25, 2009
Last update date Aug 28, 2018
Contact name charles decraene
Organization name Institut Curie
Street address 26 rue d'ULM
City Paris
ZIP/Postal code 75248 cedex 05
Country France
 
Platform ID GPL570
Series (1)
GSE15398 Evaluation of methods for amplification of picogram amounts of total RNA for whole genome expression profiling
Relations
Reanalyzed by GSE119087

Data table header descriptions
ID_REF
VALUE done by mas5.0
ABS_CALL done by mas5.0
DETECTION P-VALUE done by mas5.0

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 400.426 P 6.02111e-05
AFFX-BioB-M_at 675.994 P 4.42873e-05
AFFX-BioB-3_at 397.982 P 4.42873e-05
AFFX-BioC-5_at 1145.24 P 4.42873e-05
AFFX-BioC-3_at 1255.4 P 4.42873e-05
AFFX-BioDn-5_at 2586.73 P 4.42873e-05
AFFX-BioDn-3_at 4092.68 P 4.42873e-05
AFFX-CreX-5_at 12645.1 P 5.16732e-05
AFFX-CreX-3_at 14030.5 P 4.42873e-05
AFFX-DapX-5_at 0.94021 A 0.868639
AFFX-DapX-M_at 3.68363 A 0.760937
AFFX-DapX-3_at 1.62516 A 0.99238
AFFX-LysX-5_at 2.51498 A 0.9273
AFFX-LysX-M_at 15.5283 A 0.275146
AFFX-LysX-3_at 10.0487 A 0.139482
AFFX-PheX-5_at 1.79034 A 0.963431
AFFX-PheX-M_at 2.17099 A 0.921998
AFFX-PheX-3_at 19.9168 A 0.250796
AFFX-ThrX-5_at 7.79073 A 0.5
AFFX-ThrX-M_at 4.2328 A 0.699394

Total number of rows: 54675

Table truncated, full table size 1624 Kbytes.




Supplementary file Size Download File type/resource
GSM386147.CEL.gz 7.9 Mb (ftp)(http) CEL
GSM386147.CHP.gz 489.8 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

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