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Sample GSM386278 Query DataSets for GSM386278
Status Public on Jun 02, 2009
Title Universal Human Reference RNA amplified using RiboAmp™ HS RNA Amplification Kit (Arcturus), 500 pg, rep1
Sample type RNA
 
Source name Universal Human Reference RNA
Organism Homo sapiens
Characteristics protocol: RiboAmp™ HS RNA Amplification Kit (Arcturus)
Biomaterial provider Stratagene
Extracted molecule total RNA
Extraction protocol not applicable
Label biotin
Label protocol Biotinylated targets were prepared according to manufacturer's instructions (Arcturus)
 
Hybridization protocol Hybridization mixture was prepared according to Affymetrix procedures
Scan protocol GeneChips were scanned using a 7G scanner (Affymetrix)
Description no additional information
Data processing MAS5.0
 
Submission date Mar 25, 2009
Last update date Aug 28, 2018
Contact name charles decraene
Organization name Institut Curie
Street address 26 rue d'ULM
City Paris
ZIP/Postal code 75248 cedex 05
Country France
 
Platform ID GPL570
Series (1)
GSE15398 Evaluation of methods for amplification of picogram amounts of total RNA for whole genome expression profiling
Relations
Reanalyzed by GSE119087

Data table header descriptions
ID_REF
VALUE done by mas5.0
ABS_CALL done by mas5.0
DETECTION P-VALUE done by mas5.0

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 1437.09 P 5.16732e-05
AFFX-BioB-M_at 2337.3 P 4.42873e-05
AFFX-BioB-3_at 1482.53 P 4.42873e-05
AFFX-BioC-5_at 4482.39 P 4.42873e-05
AFFX-BioC-3_at 4002.4 P 4.42873e-05
AFFX-BioDn-5_at 9695.65 P 4.42873e-05
AFFX-BioDn-3_at 16172.1 P 4.42873e-05
AFFX-CreX-5_at 46296.1 P 5.16732e-05
AFFX-CreX-3_at 44399.5 P 4.42873e-05
AFFX-DapX-5_at 2.39029 A 0.891041
AFFX-DapX-M_at 35.1856 A 0.425962
AFFX-DapX-3_at 64.8121 P 0.00931687
AFFX-LysX-5_at 12.951 A 0.425962
AFFX-LysX-M_at 2.65539 A 0.897835
AFFX-LysX-3_at 104.404 P 0.002867
AFFX-PheX-5_at 8.0626 A 0.868639
AFFX-PheX-M_at 19.062 A 0.645547
AFFX-PheX-3_at 41.1734 A 0.0676785
AFFX-ThrX-5_at 7.2811 A 0.860538
AFFX-ThrX-M_at 36.0431 A 0.327079

Total number of rows: 54675

Table truncated, full table size 1608 Kbytes.




Supplementary file Size Download File type/resource
GSM386278.CEL.gz 7.3 Mb (ftp)(http) CEL
GSM386278.CHP.gz 496.9 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

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