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Sample GSM386333 Query DataSets for GSM386333
Status Public on Jun 02, 2009
Title Universal Human Reference RNA amplified using RiboAmp™ HS RNA Amplification Kit (Arcturus), 500 pg, rep2
Sample type RNA
 
Source name Universal Human Reference RNA
Organism Homo sapiens
Characteristics protocol: RiboAmp™ HS RNA Amplification Kit (Arcturus)
Biomaterial provider Stratagene
Extracted molecule total RNA
Extraction protocol not applicable
Label biotin
Label protocol Biotinylated targets were prepared according to manufacturer's instructions (Arcturus)
 
Hybridization protocol Hybridization mixture was prepared according to Affymetrix procedures
Scan protocol GeneChips were scanned using a 7G scanner (Affymetrix)
Description no additional information
Data processing MAS5.0
 
Submission date Mar 25, 2009
Last update date Aug 28, 2018
Contact name charles decraene
Organization name Institut Curie
Street address 26 rue d'ULM
City Paris
ZIP/Postal code 75248 cedex 05
Country France
 
Platform ID GPL570
Series (1)
GSE15398 Evaluation of methods for amplification of picogram amounts of total RNA for whole genome expression profiling
Relations
Reanalyzed by GSE119087

Data table header descriptions
ID_REF
VALUE done by mas5.0
ABS_CALL done by mas5.0
DETECTION P-VALUE done by mas5.0

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 611.18 P 5.16732e-05
AFFX-BioB-M_at 771.802 P 4.42873e-05
AFFX-BioB-3_at 642.583 P 5.16732e-05
AFFX-BioC-5_at 1504.01 P 4.42873e-05
AFFX-BioC-3_at 1506.5 P 4.42873e-05
AFFX-BioDn-5_at 3160.48 P 4.42873e-05
AFFX-BioDn-3_at 5157.69 P 4.42873e-05
AFFX-CreX-5_at 22541.3 P 4.42873e-05
AFFX-CreX-3_at 15966 P 4.42873e-05
AFFX-DapX-5_at 21.4239 A 0.455413
AFFX-DapX-M_at 29.1137 A 0.5
AFFX-DapX-3_at 4.82648 A 0.993146
AFFX-LysX-5_at 28.1049 A 0.327079
AFFX-LysX-M_at 20.5959 A 0.574038
AFFX-LysX-3_at 29.5612 A 0.147939
AFFX-PheX-5_at 19.7136 A 0.588627
AFFX-PheX-M_at 3.42679 A 0.921998
AFFX-PheX-3_at 8.43453 A 0.772364
AFFX-ThrX-5_at 27.8285 M 0.0629293
AFFX-ThrX-M_at 5.82311 A 0.883887

Total number of rows: 54675

Table truncated, full table size 1610 Kbytes.




Supplementary file Size Download File type/resource
GSM386333.CEL.gz 7.4 Mb (ftp)(http) CEL
GSM386333.CHP.gz 495.3 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

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