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Sample GSM386459 Query DataSets for GSM386459
Status Public on Jun 02, 2009
Title Universal Human Reference RNA amplified using WT-Amplification™ Pico kit (Nugen), 50 pg, rep2
Sample type RNA
Source name Universal Human Reference RNA
Organism Homo sapiens
Characteristics protocol: WT-Amplification™ Pico kit (Nugen)
Biomaterial provider Stratagene
Extracted molecule total RNA
Extraction protocol not applicable
Label biotin
Label protocol FL-Ovation™ cDNA Biotin Module V2 (Nugen)
Hybridization protocol Hybridization mixture was prepared according to Nugen and Affymetrix procedures
Scan protocol GeneChips were scanned using a 7G scanner (Affymetrix)
Description no additional information
Data processing MAS5.0
Submission date Mar 25, 2009
Last update date Aug 28, 2018
Contact name charles decraene
Organization name Institut Curie
Street address 26 rue d'ULM
City Paris
ZIP/Postal code 75248 cedex 05
Country France
Platform ID GPL570
Series (1)
GSE15398 Evaluation of methods for amplification of picogram amounts of total RNA for whole genome expression profiling
Reanalyzed by GSE119087

Data table header descriptions
VALUE done by mas5.0
ABS_CALL done by mas5.0
DETECTION P-VALUE done by mas5.0

Data table
AFFX-BioB-5_at 2683.08 P 4.42873e-05
AFFX-BioB-M_at 5834.75 P 4.42873e-05
AFFX-BioB-3_at 4756.04 P 4.42873e-05
AFFX-BioC-5_at 10340.9 P 4.42873e-05
AFFX-BioC-3_at 6463.04 P 4.42873e-05
AFFX-BioDn-5_at 19945.3 P 4.42873e-05
AFFX-BioDn-3_at 32121 P 4.42873e-05
AFFX-CreX-5_at 55974.7 P 5.16732e-05
AFFX-CreX-3_at 58340.9 P 4.42873e-05
AFFX-DapX-5_at 7.14019 A 0.699394
AFFX-DapX-M_at 27.7379 A 0.455413
AFFX-DapX-3_at 5.45109 A 0.772383
AFFX-LysX-5_at 6.51113 A 0.699394
AFFX-LysX-M_at 31.9323 A 0.275146
AFFX-LysX-3_at 34.3692 A 0.195266
AFFX-PheX-5_at 5.45327 A 0.910541
AFFX-PheX-M_at 2.52248 A 0.86866
AFFX-PheX-3_at 23.3447 A 0.287743
AFFX-ThrX-5_at 26.4719 A 0.382599
AFFX-ThrX-M_at 8.40967 A 0.227597

Total number of rows: 54675

Table truncated, full table size 1606 Kbytes.

Supplementary file Size Download File type/resource
GSM386459.CEL.gz 7.1 Mb (ftp)(http) CEL
GSM386459.CHP.gz 506.8 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

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