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Sample GSM386461 Query DataSets for GSM386461
Status Public on Jun 02, 2009
Title Universal Human Reference RNA amplified using WT-Amplification™ Pico kit (Nugen), 100 pg, rep2
Sample type RNA
 
Source name Universal Human Reference RNA
Organism Homo sapiens
Characteristics protocol: WT-Amplification™ Pico kit (Nugen)
Biomaterial provider Stratagene
Extracted molecule total RNA
Extraction protocol not applicable
Label biotin
Label protocol FL-Ovation™ cDNA Biotin Module V2 (Nugen)
 
Hybridization protocol Hybridization mixture was prepared according to Nugen and Affymetrix procedures
Scan protocol GeneChips were scanned using a 7G scanner (Affymetrix)
Description no additional information
Data processing MAS5.0
 
Submission date Mar 25, 2009
Last update date Aug 28, 2018
Contact name charles decraene
Organization name Institut Curie
Street address 26 rue d'ULM
City Paris
ZIP/Postal code 75248 cedex 05
Country France
 
Platform ID GPL570
Series (1)
GSE15398 Evaluation of methods for amplification of picogram amounts of total RNA for whole genome expression profiling
Relations
Reanalyzed by GSE119087

Data table header descriptions
ID_REF
VALUE done by mas5.0
ABS_CALL done by mas5.0
DETECTION P-VALUE done by mas5.0

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 1801.82 P 4.42873e-05
AFFX-BioB-M_at 3871.34 P 4.42873e-05
AFFX-BioB-3_at 3134.34 P 4.42873e-05
AFFX-BioC-5_at 6361.58 P 4.42873e-05
AFFX-BioC-3_at 4014.97 P 4.42873e-05
AFFX-BioDn-5_at 13871.9 P 4.42873e-05
AFFX-BioDn-3_at 21958 P 4.42873e-05
AFFX-CreX-5_at 37789.9 P 5.16732e-05
AFFX-CreX-3_at 41668.9 P 4.42873e-05
AFFX-DapX-5_at 11.5471 A 0.340661
AFFX-DapX-M_at 0.867148 A 0.984825
AFFX-DapX-3_at 2.51149 A 0.963443
AFFX-LysX-5_at 11.4137 A 0.313708
AFFX-LysX-M_at 16.1509 A 0.108979
AFFX-LysX-3_at 14.8466 A 0.354453
AFFX-PheX-5_at 6.47187 A 0.814869
AFFX-PheX-M_at 1.25 A 0.94162
AFFX-PheX-3_at 25.0573 A 0.287743
AFFX-ThrX-5_at 3.49041 A 0.876448
AFFX-ThrX-M_at 4.5379 A 0.945802

Total number of rows: 54675

Table truncated, full table size 1614 Kbytes.




Supplementary file Size Download File type/resource
GSM386461.CEL.gz 7.1 Mb (ftp)(http) CEL
GSM386461.CHP.gz 507.4 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

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