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Sample GSM386462 Query DataSets for GSM386462
Status Public on Jun 02, 2009
Title Universal Human Reference RNA amplified using WT-Amplification™ Pico kit (Nugen), 250 pg, rep1
Sample type RNA
 
Source name Universal Human Reference RNA
Organism Homo sapiens
Characteristics protocol: WT-Amplification™ Pico kit (Nugen)
Biomaterial provider Stratagene
Extracted molecule total RNA
Extraction protocol not applicable
Label biotin
Label protocol FL-Ovation™ cDNA Biotin Module V2 (Nugen)
 
Hybridization protocol Hybridization mixture was prepared according to Nugen and Affymetrix procedures
Scan protocol GeneChips were scanned using a 7G scanner (Affymetrix)
Description no additional information
Data processing MAS5.0
 
Submission date Mar 25, 2009
Last update date Aug 28, 2018
Contact name charles decraene
Organization name Institut Curie
Street address 26 rue d'ULM
City Paris
ZIP/Postal code 75248 cedex 05
Country France
 
Platform ID GPL570
Series (1)
GSE15398 Evaluation of methods for amplification of picogram amounts of total RNA for whole genome expression profiling
Relations
Reanalyzed by GSE119087

Data table header descriptions
ID_REF
VALUE done by mas5.0
ABS_CALL done by mas5.0
DETECTION P-VALUE done by mas5.0

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 1311.26 P 4.42873e-05
AFFX-BioB-M_at 2629.83 P 4.42873e-05
AFFX-BioB-3_at 2090.66 P 4.42873e-05
AFFX-BioC-5_at 4158.9 P 4.42873e-05
AFFX-BioC-3_at 2573.23 P 4.42873e-05
AFFX-BioDn-5_at 7309.54 P 4.42873e-05
AFFX-BioDn-3_at 11144.5 P 4.42873e-05
AFFX-CreX-5_at 22134.5 P 5.16732e-05
AFFX-CreX-3_at 23500.4 P 4.42873e-05
AFFX-DapX-5_at 1.00108 A 0.937071
AFFX-DapX-M_at 2.27593 A 0.897855
AFFX-DapX-3_at 0.706944 A 0.990663
AFFX-LysX-5_at 0.830345 A 0.891021
AFFX-LysX-M_at 6.8008 A 0.275076
AFFX-LysX-3_at 1.8738 A 0.804734
AFFX-PheX-5_at 9.02343 A 0.227636
AFFX-PheX-M_at 0.810487 A 0.979978
AFFX-PheX-3_at 8.06121 A 0.617401
AFFX-ThrX-5_at 3.11239 A 0.760956
AFFX-ThrX-M_at 8.29479 A 0.544591

Total number of rows: 54675

Table truncated, full table size 1639 Kbytes.




Supplementary file Size Download File type/resource
GSM386462.CEL.gz 7.3 Mb (ftp)(http) CEL
GSM386462.CHP.gz 498.4 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

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