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Sample GSM386466 Query DataSets for GSM386466
Status Public on Jun 02, 2009
Title Universal Human Reference RNA amplified using WT-Amplification™ Pico kit (Nugen), 500 pg, rep2
Sample type RNA
 
Source name Universal Human Reference RNA
Organism Homo sapiens
Characteristics protocol: WT-Amplification™ Pico kit (Nugen)
Biomaterial provider Stratagene
Extracted molecule total RNA
Extraction protocol not applicable
Label biotin
Label protocol FL-Ovation™ cDNA Biotin Module V2 (Nugen)
 
Hybridization protocol Hybridization mixture was prepared according to Nugen and Affymetrix procedures
Scan protocol GeneChips were scanned using a 7G scanner (Affymetrix)
Description no additional information
Data processing MAS5.0
 
Submission date Mar 25, 2009
Last update date Aug 28, 2018
Contact name charles decraene
Organization name Institut Curie
Street address 26 rue d'ULM
City Paris
ZIP/Postal code 75248 cedex 05
Country France
 
Platform ID GPL570
Series (1)
GSE15398 Evaluation of methods for amplification of picogram amounts of total RNA for whole genome expression profiling
Relations
Reanalyzed by GSE119087

Data table header descriptions
ID_REF
VALUE done by mas5.0
ABS_CALL done by mas5.0
DETECTION P-VALUE done by mas5.0

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 877.692 P 4.42873e-05
AFFX-BioB-M_at 2033.04 P 4.42873e-05
AFFX-BioB-3_at 1556.09 P 4.42873e-05
AFFX-BioC-5_at 3224.89 P 4.42873e-05
AFFX-BioC-3_at 2085.29 P 4.42873e-05
AFFX-BioDn-5_at 6903.39 P 4.42873e-05
AFFX-BioDn-3_at 10716.4 P 4.42873e-05
AFFX-CreX-5_at 19070.3 P 5.16732e-05
AFFX-CreX-3_at 19733.2 P 4.42873e-05
AFFX-DapX-5_at 10.342 A 0.411373
AFFX-DapX-M_at 1.36325 A 0.976081
AFFX-DapX-3_at 1.04213 A 0.916426
AFFX-LysX-5_at 4.90395 A 0.544587
AFFX-LysX-M_at 11.691 A 0.147939
AFFX-LysX-3_at 9.67502 A 0.455413
AFFX-PheX-5_at 1.98106 A 0.843268
AFFX-PheX-M_at 1.2276 A 0.876469
AFFX-PheX-3_at 3.06057 A 0.659339
AFFX-ThrX-5_at 8.31033 A 0.340609
AFFX-ThrX-M_at 9.62303 A 0.195246

Total number of rows: 54675

Table truncated, full table size 1638 Kbytes.




Supplementary file Size Download File type/resource
GSM386466.CEL.gz 7.4 Mb (ftp)(http) CEL
GSM386466.CHP.gz 495.9 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

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