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Sample GSM3893 Query DataSets for GSM3893
Status Public on May 12, 2003
Title Rat extraocular muscle in dark reared
Sample type SAGE
Anchor NlaIII
Tag Count 31776
Tag Length 10
 
Source name Adult rat extraocular muscle
Organism Rattus norvegicus
Extracted molecule total RNA
 
Description Comprehensive evaluation of the extraocular muscle critical period by expression profiling in the dark reared rat and monocularly deprived monkey
Keywords = Rat extraocular muscle, critical period
 
Submission date Feb 11, 2003
Last update date Nov 19, 2008
Contact name Henry J. Kaminski
E-mail(s) henry.kaminski@case.edu, HKaminsk@slu.edu
Phone 216-368-0250
Fax 216-368-1710
Organization name Case Western Reserve University
Department Neurology
Lab Henry J. Kaminski(henry.kaminski@case.edu)
Street address 11100 Euclid Avenue
City Cleveland
State/province OH
ZIP/Postal code 44106-5068
Country USA
 
Platform ID GPL23
Series (1)
GSE497 Extraocular muscle, expression changes in critical period (Porter lab)

Data table header descriptions
TAG 10 bp DNA sequence representing SAGE tag
COUNT excludes linker sequences (0.05% of total)
TPM tags per million

Data table
TAG COUNT TPM
ATAACACATA 1645 51768.63
ATACTGACAC 1158 36442.60
GATGCCCCCC 1128 35498.49
TACCACCTTT 342 10762.84
AGCCATCCCT 339 10668.43
AATCGGAGGC 328 10322.26
TAGGTACAGG 328 10322.26
TGGGTTGTCT 225 7080.82
GAGGGTCGGA 193 6073.77
TAGGCCACAC 183 5759.06
GCCTTCCTCA 176 5538.77
GATAAAACCA 171 5381.42
ATGACTATTA 163 5129.66
AGCGATTCAA 158 4972.31
CCCAGGCACT 156 4909.37
TTTGGGGAGA 149 4689.07
TTGTTAGTGC 145 4563.19
TAAAATTGTA 140 4405.84
CTCAGGTCTC 136 4279.96
TAACTTGGAC 131 4122.61

Total number of rows: 10105

Table truncated, full table size 189 Kbytes.




Supplementary data files not provided
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