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GEO accession:
Sample GSM389906
Query DataSets for GSM389906
Status
Public on Jan 01, 2010
Title
Total blood mRNA profile from 14 pooled individuals (7 males + 7 females) before EPO treatment
Sample type
SAGE
Anchor
NlaIII
Tag Count
29779
Tag Length
10
Source name
total blood - control
Organism
Homo sapiens
Characteristics
tissue = unpurified blood cells
Treatment protocol
no
Extracted molecule
polyA RNA
Extraction protocol
TRIzol
Description
unpurified blood cells from 7 males + 7 females, pooled after RNA extraction
Data processing
Skuld-Tech (Montpellier, France) platform
Submission date
Apr 07, 2009
Last update date
Apr 07, 2009
Contact name
David Piquemal
E-mail(s)
piquemal@univ-montp2.fr
Phone
+33 610430140
Organization name
ACOBIOM
Street address
1682, rue de la Valsière
City
Montpellier
ZIP/Postal code
34184
Country
France
Platform ID
GPL4
Series (1)
GSE15590
Blood mRNA profile during EPO treatment
Data table header descriptions
TAG
COUNT
TPM
tags per million
Data table
TAG
COUNT
TPM
GCAAGAAAGT
5684
190872.76
CTTCTTGCCC
405
13600.19
GTGCACCTGA
2537
85194.26
CCCAACGCGC
641
21525.24
AGCCTTCACC
972
32640.45
GTTGTGGTTA
384
12894.99
TACCTGCAGA
217
7287.01
GTGCATCTGA
1030
34588.13
GTGGGTTCTC
31
1041.00
TAGGTTGTCT
182
6111.69
GTGCTGTCTC
154
5171.43
GTGTCTGTTT
69
2317.07
TCGTCCACGT
168
5641.56
GCATAATAGG
91
3055.84
TTGGTCCTCT
161
5406.49
GTGGCCACGG
76
2552.13
GTGACCACGG
78
2619.30
TTGTAATCGT
47
1578.29
ATAATTCTTT
100
3358.07
TTGGTGAAGG
76
2552.13
Total number of rows:
8963
Table truncated, full table size
167 Kbytes
.
Supplementary data files not provided
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