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GEO accession:
Sample GSM41324
Query DataSets for GSM41324
Status
Public on Feb 10, 2005
Title
ATH whole genome chip 1
Sample type
RNA
Source name
T87 line of liquid grown tissue culture cells of Arabidopsis thaliana
Organism
Arabidopsis thaliana
Extracted molecule
total RNA
Description
Identification of novel transcribed sequences in Arabidopsis thaliana using high density genome tiling arrays.
Submission date
Feb 05, 2005
Last update date
May 27, 2005
Contact name
Waraporn Tongprasit
E-mail(s)
wtongprasit@mail.arc.nasa.gov
Phone
1-650-604-4779
URL
http://phenomorph.arc.nasa.gov
Organization name
NASA Ames Research Center
Department
Lab
NASA Ames Genome Research Facility
Street address
City
Moffett Field
State/province
CA
ZIP/Postal code
94043
Country
USA
Platform ID
GPL1840
Series (1)
GSE2247
Arabidopsis Whole Genome 36-mer
Data table header descriptions
ID_REF
X
X coordinate of the array feature
Y
Y coordinate of the array feature
VALUE
Mean fluorescence signal intensity of the array feature, calculated over 9 pixels at 5 µm resolution
SIGNAL_STDEV
Standard deviation of the fluorescence signal for the array feature
Data table
ID_REF
X
Y
VALUE
SIGNAL_STDEV
1.1
1
1
254.66667
74.80475
1.3
1
3
1877.4445
714.75525
1.5
1
5
559.8889
118.47937
1.7
1
7
111.44444
39.17305
1.9
1
9
588.6667
252.33559
1.11
1
11
88.111115
21.985476
1.13
1
13
106.888885
25.379345
1.15
1
15
107.22222
46.031994
1.17
1
17
229.11111
51.133266
1.19
1
19
401.77777
70.648384
1.21
1
21
96.44444
21.190275
1.23
1
23
90.0
17.0
1.25
1
25
176.0
48.59527
1.27
1
27
330.33334
92.21578
1.29
1
29
128.33333
45.428516
1.31
1
31
113.0
47.67861
1.33
1
33
844.0
104.919014
1.35
1
35
462.44446
63.40369
1.37
1
37
81.111115
17.003267
1.39
1
39
120.44444
28.315681
Total number of rows:
390732
Table truncated, full table size
13215 Kbytes
.
Supplementary data files not provided
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