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GEO accession:
Sample GSM41325
Query DataSets for GSM41325
Status
Public on Feb 10, 2005
Title
ATH whole genome chip 2
Sample type
RNA
Source name
T87 line of liquid grown tissue culture cells of Arabidopsis thaliana
Organism
Arabidopsis thaliana
Extracted molecule
total RNA
Description
Identification of novel transcribed sequences in Arabidopsis thaliana using high density genome tiling arrays.
Submission date
Feb 05, 2005
Last update date
May 27, 2005
Contact name
Waraporn Tongprasit
E-mail(s)
wtongprasit@mail.arc.nasa.gov
Phone
1-650-604-4779
URL
http://phenomorph.arc.nasa.gov
Organization name
NASA Ames Research Center
Department
Lab
NASA Ames Genome Research Facility
Street address
City
Moffett Field
State/province
CA
ZIP/Postal code
94043
Country
USA
Platform ID
GPL1841
Series (1)
GSE2247
Arabidopsis Whole Genome 36-mer
Data table header descriptions
ID_REF
X
X coordinate of the array feature
Y
Y coordinate of the array feature
VALUE
Mean fluorescence signal intensity of the array feature, calculated over 9 pixels at 5 µm resolution
SIGNAL_STDEV
Standard deviation of the fluorescence signal for the array feature
Data table
ID_REF
X
Y
VALUE
SIGNAL_STDEV
1.1
1
1
127.666664
25.32785
1.3
1
3
1166.4445
175.03293
1.5
1
5
109.888885
35.86936
1.7
1
7
133.33333
51.843513
1.9
1
9
147.88889
40.80271
1.11
1
11
119.22222
33.089943
1.13
1
13
133.88889
41.714638
1.15
1
15
2281.889
953.933
1.17
1
17
156.77777
46.876907
1.19
1
19
729.0
201.37527
1.21
1
21
105.44444
29.309175
1.23
1
23
135.77777
42.236767
1.25
1
25
508.22223
93.325745
1.27
1
27
516.7778
77.52867
1.29
1
29
104.111115
44.177044
1.31
1
31
159.22223
43.33237
1.33
1
33
402.44446
98.454445
1.35
1
35
94.333336
33.07189
1.37
1
37
109.0
27.179956
1.39
1
39
108.22222
32.217144
Total number of rows:
390732
Table truncated, full table size
13238 Kbytes
.
Supplementary data files not provided
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