GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM41328
Query DataSets for GSM41328
Status
Public on Feb 10, 2005
Title
ATH whole genome chip 5
Sample type
RNA
Source name
T87 line of liquid grown tissue culture cells of Arabidopsis thaliana
Organism
Arabidopsis thaliana
Extracted molecule
total RNA
Description
Identification of novel transcribed sequences in Arabidopsis thaliana using high density genome tiling arrays.
Submission date
Feb 05, 2005
Last update date
May 27, 2005
Contact name
Waraporn Tongprasit
E-mail(s)
wtongprasit@mail.arc.nasa.gov
Phone
1-650-604-4779
URL
http://phenomorph.arc.nasa.gov
Organization name
NASA Ames Research Center
Department
Lab
NASA Ames Genome Research Facility
Street address
City
Moffett Field
State/province
CA
ZIP/Postal code
94043
Country
USA
Platform ID
GPL1845
Series (1)
GSE2247
Arabidopsis Whole Genome 36-mer
Data table header descriptions
ID_REF
X
X coordinate of the array feature
Y
Y coordinate of the array feature
VALUE
Mean fluorescence signal intensity of the array feature, calculated over 9 pixels at 5 µm resolution
SIGNAL_STDEV
Standard deviation of the fluorescence signal for the array feature
Data table
ID_REF
X
Y
VALUE
SIGNAL_STDEV
1.1
1
1
5116.6665
1057.8126
1.3
1
3
116.0
30.479502
1.5
1
5
169.11111
46.624683
1.7
1
7
351.66666
67.3257
1.9
1
9
166.33333
58.474354
1.11
1
11
134.55556
64.24779
1.13
1
13
1292.8889
166.34937
1.15
1
15
147.77777
45.04658
1.17
1
17
237.88889
72.374794
1.19
1
19
527.3333
95.48429
1.21
1
21
131.88889
42.86445
1.23
1
23
518.8889
79.88186
1.25
1
25
322.44446
97.366714
1.27
1
27
137.33333
30.983868
1.29
1
29
2767.2222
515.10724
1.31
1
31
770.0
259.1129
1.33
1
33
162.33333
45.42026
1.35
1
35
14276.223
7377.803
1.37
1
37
205.66667
31.945265
1.39
1
39
1156.5555
209.08916
Total number of rows:
390730
Table truncated, full table size
13218 Kbytes
.
Supplementary data files not provided
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|