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GEO accession:
Sample GSM41335
Query DataSets for GSM41335
Status
Public on Feb 10, 2005
Title
ATH whole genome chip 12
Sample type
RNA
Source name
T87 line of liquid grown tissue culture cells of Arabidopsis thaliana
Organism
Arabidopsis thaliana
Extracted molecule
total RNA
Description
Identification of novel transcribed sequences in Arabidopsis thaliana using high density genome tiling arrays.
Submission date
Feb 05, 2005
Last update date
May 27, 2005
Contact name
Waraporn Tongprasit
E-mail(s)
wtongprasit@mail.arc.nasa.gov
Phone
1-650-604-4779
URL
http://phenomorph.arc.nasa.gov
Organization name
NASA Ames Research Center
Department
Lab
NASA Ames Genome Research Facility
Street address
City
Moffett Field
State/province
CA
ZIP/Postal code
94043
Country
USA
Platform ID
GPL1852
Series (1)
GSE2247
Arabidopsis Whole Genome 36-mer
Data table header descriptions
ID_REF
X
X coordinate of the array feature
Y
Y coordinate of the array feature
VALUE
Mean fluorescence signal intensity of the array feature, calculated over 9 pixels at 5 µm resolution
SIGNAL_STDEV
Standard deviation of the fluorescence signal for the array feature
Data table
ID_REF
X
Y
VALUE
SIGNAL_STDEV
1.1
1
1
306.44446
125.01811
1.3
1
3
197.44444
49.3612
1.5
1
5
184.88889
47.852493
1.7
1
7
204.44444
66.174225
1.9
1
9
265.66666
59.453762
1.11
1
11
429.44446
218.12102
1.13
1
13
164.0
70.32247
1.15
1
15
327.0
94.162094
1.17
1
17
1985.3334
1515.7637
1.19
1
19
207.44444
55.919834
1.21
1
21
105.22222
41.85026
1.23
1
23
91.0
35.43656
1.25
1
25
556.6667
176.67838
1.27
1
27
163.55556
56.48697
1.29
1
29
244.44444
80.212395
1.31
1
31
155.77777
69.34115
1.33
1
33
483.77777
129.51619
1.35
1
35
1730.3334
737.77435
1.37
1
37
273.8889
133.62582
1.39
1
39
123.0
47.31279
Total number of rows:
390730
Table truncated, full table size
13224 Kbytes
.
Supplementary data files not provided
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