NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM4272668 Query DataSets for GSM4272668
Status Public on Jan 15, 2023
Title HNC-Fadu cell line Parent cell rep 1
Sample type RNA
 
Source name HNC-Fadu cell line
Organism Homo sapiens
Characteristics group: Parent cell
cell line: HNC-Fadu cell line
Treatment protocol After matrigel invasion method to generate highly invasive cells and samples were collected for futher RNA extraction
Extracted molecule total RNA
Extraction protocol Trizol extraction of total RNA was performed to according manufacture's instructions
Label biotin
Label protocol Affymetrix
 
Hybridization protocol Affymetrix
Scan protocol Affymetrix
Description Gene expression data from parental cells
Data processing The data were analyzed with RMA normalization by using Partek Genomics Suite software version 7
 
Submission date Jan 15, 2020
Last update date Jan 15, 2023
Contact name Ann-Joy Cheng
E-mail(s) annjoycheng@gap.cgu.edu.tw
Organization name CGU
Street address No.259, Wenhua 1st Rd., Guishan Dist., Taoyuan City
City Taoyuan
ZIP/Postal code 33302
Country Taiwan
 
Platform ID GPL96
Series (1)
GSE143689 Expression profiling of invasion associated molecules in head and neck cancer cells

Data table header descriptions
ID_REF
VALUE RMA signal intensity

Data table
ID_REF VALUE
1007_s_at 9.01807
1053_at 6.96717
117_at 4.24886
121_at 6.42265
1255_g_at 3.09953
1294_at 5.03136
1316_at 4.55443
1320_at 3.61906
1405_i_at 3.9755
1431_at 2.95306
1438_at 5.09446
1487_at 6.80154
1494_f_at 4.1684
1598_g_at 7.0348
160020_at 6.35065
1729_at 6.4621
1773_at 5.06377
177_at 3.8135
179_at 7.94344
1861_at 5.35933

Total number of rows: 22283

Table truncated, full table size 409 Kbytes.




Supplementary file Size Download File type/resource
GSM4272668_Fadu-pt-2.CEL.gz 2.0 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap