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Sample GSM440091 Query DataSets for GSM440091
Status Public on Aug 31, 2009
Title INPUT ZT15, replica 2
Sample type RNA
Source name fly head
Organism Drosophila melanogaster
Characteristics time point: ZT15
replicate: 2
tissue: head
developmental stage: adult
Growth protocol Flies were grown under standard conditions in 12hs light and 12hs dark cycles
Extracted molecule total RNA
Extraction protocol Heads were collected and RNA extracted using TRIZOL
Label biotin
Label protocol RNA was utilized to prepare cDNA and cRNA using the Affymetrix IVT labeling Kit
Hybridization protocol Following fragmentation, 10 ug of cRNA were hybridized for 18 hrs at 45C on GeneChip Drosophila Genome 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
Scan protocol GeneChips were scanned with the Affymetrix GeneArray Scanner G7
Description INP sample, ZT15
Data processing The data were processed with GCRMA algorithm in the Bioconductor with default settings
Submission date Aug 13, 2009
Last update date Aug 28, 2018
Contact name Ken Sugino
Organization name Janelia Research Campus
Lab NeuroSeq
Street address 19700 Helix Dr
City Ashburn
State/province VA
ZIP/Postal code 20147
Country USA
Platform ID GPL1322
Series (2)
GSE17629 Circadian analysis of miRNAs and their targets
Reanalyzed by GSE119084

Data table header descriptions
VALUE GCRMA summary value

Data table
1616608_a_at 11.9184
1622892_s_at 8.46382
1622893_at 13.6739
1622894_at 6.81749
1622895_at 6.3713
1622896_at 8.28652
1622897_at 4.86811
1622898_a_at 8.70656
1622899_at 4.35279
1622900_at 3.5247
1622901_at 4.34264
1622902_at 5.18478
1622903_s_at 8.46456
1622904_at 4.22974
1622905_at 3.62138
1622906_at 6.80725
1622907_at 9.28089
1622908_a_at 6.09756
1622909_at 8.81153
1622910_at 4.09562

Total number of rows: 18952

Table truncated, full table size 358 Kbytes.

Supplementary file Size Download File type/resource
GSM440091.CEL.gz 1.9 Mb (ftp)(http) CEL
Processed data included within Sample table

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