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Sample GSM4407494 Query DataSets for GSM4407494
Status Public on Mar 12, 2020
Title QM84C20
Sample type RNA
 
Source name 0.3 M NaCl eluted Exo
Organism Mus musculus
Characteristics sample type: CTL culture supernatant
Treatment protocol Murine CTL culture supernatant was subjected to DEAE column chromatograpy after concentration of deproteinization of 750 kDa MWCO ultrafiltration.
Growth protocol Murine CTL was cultured for 7days, and culture supernatant was collected.
Extracted molecule total RNA
Extraction protocol Total RNA was extracted, and amplified with Ambion Amino Allyl aRNA kit.
Label Cy5
Label protocol Amplified aRNA was labeled with Amersham Cy5 mono-reactive dye (GE #PA25001)
 
Hybridization protocol Hybridization was performed with hybridyzation chamber (Takara Bio #TX711
Scan protocol 3D-Gene Scanner 3000 (Toray) was used in this study.
Data processing After the image was acquired with the optimal PMT value (laser-100%), it was digitized with digitizing software.
 
Submission date Mar 11, 2020
Last update date Mar 12, 2020
Contact name Naohiro Seo
E-mail(s) seo-naohiro@clin.medic.mie-u.ac.jp
Organization name Mie University Graduate School of Medicine
Department Immuno-Gene Therpy
Street address 2-174 Edobashi
City Tsu
State/province Mie
ZIP/Postal code 514-8507
Country Japan
 
Platform ID GPL22438
Series (1)
GSE146815 mRNA microarray analysis of murine CTL EVs separated by ion exchange method [mRNA]

Data table header descriptions
ID_REF
VALUE After subtracting the BG value from the raw data, it was normalized by global normalization.
QM84C20 raw data
QM84C20 BG substraction

Data table
ID_REF VALUE QM84C20 raw data QM84C20 BG substraction
M200005345 91 95 36
M200005179 48 78 19
M200005157 29 71 11
M200005020 23 68 9
M200004998 29 70 11
M200002815 8 62 3
M200002791 13 64 5
M200002643 955 433 374
M200002616 153 119 60
M200002468 238 152 93
M200002447 28 70 11
M200002306 16 65 6
M200002281 8 62 3
M200003325 60
M200003141 122 107 48
M200003123 17 66 7
M200002976 31 71 12
M200002960 194 135 76
M200000665 10 63 4
M200000650 15 65 6

Total number of rows: 23473

Table truncated, full table size 437 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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