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Sample GSM4407495 Query DataSets for GSM4407495
Status Public on Mar 12, 2020
Title QM84C21
Sample type RNA
 
Source name 0.5 M NaCl eluted Exo
Organism Mus musculus
Characteristics sample type: CTL culture supernatant
Treatment protocol Murine CTL culture supernatant was subjected to DEAE column chromatograpy after concentration of deproteinization of 750 kDa MWCO ultrafiltration.
Growth protocol Murine CTL was cultured for 7days, and culture supernatant was collected.
Extracted molecule total RNA
Extraction protocol Total RNA was extracted, and amplified with Ambion Amino Allyl aRNA kit.
Label Cy5
Label protocol Amplified aRNA was labeled with Amersham Cy5 mono-reactive dye (GE #PA25001)
 
Hybridization protocol Hybridization was performed with hybridyzation chamber (Takara Bio #TX711
Scan protocol 3D-Gene Scanner 3000 (Toray) was used in this study.
Data processing After the image was acquired with the optimal PMT value (laser-100%), it was digitized with digitizing software.
 
Submission date Mar 11, 2020
Last update date Mar 12, 2020
Contact name Naohiro Seo
E-mail(s) seo-naohiro@clin.medic.mie-u.ac.jp
Organization name Mie University Graduate School of Medicine
Department Immuno-Gene Therpy
Street address 2-174 Edobashi
City Tsu
State/province Mie
ZIP/Postal code 514-8507
Country Japan
 
Platform ID GPL22438
Series (1)
GSE146815 mRNA microarray analysis of murine CTL EVs separated by ion exchange method [mRNA]

Data table header descriptions
ID_REF
VALUE After subtracting the BG value from the raw data, it was normalized by global normalization.
QM84C21 raw data
QM84C21 BG subtraction

Data table
ID_REF VALUE QM84C21 raw data QM84C21 BG subtraction
M200005345 140 94 36
M200005179 33 66 9
M200005157 32 66 8
M200005020 24 64 6
M200004998 39 68 10
M200002815 11 61 3
M200002791 58
M200002643 351 148 90
M200002616 79 78 20
M200002468 208 111 53
M200002447 20 63 5
M200002306 12 61 3
M200002281 8 60 2
M200003325 59
M200003141 119 88 31
M200003123 17 62 4
M200002976 32 66 8
M200002960 291 132 74
M200000665 5 59 1
M200000650 13 61 3

Total number of rows: 23473

Table truncated, full table size 426 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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