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Sample GSM443798 Query DataSets for GSM443798
Status Public on Nov 05, 2010
Title Gene expression: HCC1143
Sample type RNA
 
Source name RNA from cell line
Organism Homo sapiens
Characteristics cell line: HCC1143
catalog number: ATCC# CRL-2321
Extracted molecule total RNA
Extraction protocol Qiagen Mini prep
Label Affymetrix
Label protocol standard Affymetrix protocol
 
Hybridization protocol standard Affymetrix protocol
Scan protocol standard Affymetrix protocol
Description Breast cancer cell line, ATCC# CRL-2321
Data processing RMA Normalized
 
Submission date Aug 23, 2009
Last update date Nov 05, 2010
Contact name Raj Chari
E-mail(s) rchari@bccrc.ca
Organization name BC Cancer Research Centre
Department Cancer Genetics and Developmental Biology
Lab Wan Lam Lab
Street address 675 West 10th Avenue
City Vancouver
State/province BC
ZIP/Postal code V5Z 1L3
Country Canada
 
Platform ID GPL570
Series (2)
GSE17768 An integrative multi-dimensional genetic and epigenetic strategy to identify aberrant genes and pathways in cancer: gene expression
GSE21541 An integrative multi-dimensional genetic and epigenetic strategy to identify aberrant genes and pathways in cancer

Data table header descriptions
ID_REF
VALUE RMA Normalized Expression Value
ABS_CALL MAS 5.0 Call

Data table
ID_REF VALUE ABS_CALL
1007_s_at 11.19120028 P
1053_at 8.909906726 P
117_at 6.187890222 A
121_at 8.459324657 P
1255_g_at 4.045570381 A
1294_at 6.746649464 P
1316_at 6.064635656 A
1320_at 6.548635414 A
1405_i_at 5.785466502 P
1431_at 4.394457021 A
1438_at 6.594887802 A
1487_at 8.047145009 M
1494_f_at 5.871892949 A
1552256_a_at 8.607465784 P
1552257_a_at 9.820576805 P
1552258_at 5.825856123 M
1552261_at 5.784768684 A
1552263_at 7.964855391 P
1552264_a_at 9.737758469 P
1552266_at 4.81921674 A

Total number of rows: 54675

Table truncated, full table size 1318 Kbytes.




Supplementary file Size Download File type/resource
GSM443798_HCC1143.CEL.gz 4.9 Mb (ftp)(http) CEL
Processed data included within Sample table

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