|
Status |
Public on Sep 05, 2009 |
Title |
S015 |
Sample type |
RNA |
|
|
Source name |
prostate, S015
|
Organism |
Homo sapiens |
Characteristics |
patient id: P069 sample type (t/tumor; biopsy; ctrl/autopsy sample): T percentage of tumor: 0
|
Extracted molecule |
total RNA |
Extraction protocol |
QiaGen Rneasy extraction of total RNA was performed according to the manufacturer's instructions.
|
Label |
biotin
|
Label protocol |
50 microgram (10 microgram for biopsy tissue) of total RNA samples of each cases were amplified and labeled with biotin using Ovation RNA Amplification System V2 and FL-Ovation cDNA Biotin Module V2 (NuGen Inc.).
|
|
|
Hybridization protocol |
Following Affymetrix protocol.
|
Scan protocol |
GeneChips were scanned using the Affymetrix Scanner.
|
Description |
prostate
|
Data processing |
The data were analyzed and normalized with RMA.
|
|
|
Submission date |
Sep 03, 2009 |
Last update date |
Sep 04, 2009 |
Contact name |
Yipeng Wang |
E-mail(s) |
ywang@sdibr.org
|
Phone |
8585813960
|
Organization name |
Vaccine Research Institute of San Diego
|
Street address |
|
City |
San Diego |
State/province |
CA |
ZIP/Postal code |
92121 |
Country |
USA |
|
|
Platform ID |
GPL570 |
Series (1) |
GSE17951 |
Gene expression analysis of prostate cancer samples using Affymetrix U133Plus2 array |
|