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GEO accession:
Sample GSM456351
Query DataSets for GSM456351
Status
Public on Dec 29, 2009
Title
Primary hepatocyte, biological replicate 3
Sample type
RNA
Source name
Primary hepatocyte
Organism
Homo sapiens
Characteristics
cell type: primary hepatocyte
gender: female
Extracted molecule
total RNA
Extraction protocol
Trizol
Label
biotin
Label protocol
In-vitro Transcription using the GeneChip 3` IVT Express Kit
Hybridization protocol
200ul hybridization solution per GeneChip using GeneChip Hybridization, Wash and Stain Kit.
Scan protocol
Single Scan
Description
PH_3
Data processing
R/Bioconductor
Submission date
Sep 24, 2009
Last update date
Aug 15, 2013
Contact name
Steven Hart
E-mail(s)
shart3@kumc.edu
Phone
913-588-9020
Organization name
University of Kansas Medical Center
Department
Pharmacology, Toxicology & Therapeutics
Lab
Zhong Lab
Street address
3901 Rainbow Blvd
City
Kansas City
State/province
KS
ZIP/Postal code
66160
Country
USA
Platform ID
GPL570
Series (1)
GSE18269
HepaRG cells as a model of the primary human hepatocyte transcriptome
Relations
Reanalyzed by
GSE49910
Data table header descriptions
ID_REF
VALUE
log2 GC-RMA signal
Data table
ID_REF
VALUE
1007_s_at
4.74
1053_at
7.03
117_at
2.66
121_at
4.50
1255_g_at
2.30
1294_at
4.89
1316_at
3.84
1320_at
2.37
1405_i_at
2.31
1431_at
13.05
1438_at
2.30
1487_at
7.27
1494_f_at
13.26
1552256_a_at
10.31
1552257_a_at
6.88
1552258_at
2.30
1552261_at
2.30
1552263_at
6.02
1552264_a_at
5.41
1552266_at
2.30
Total number of rows:
54675
Table truncated, full table size
846 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM456351_PH_3.CEL.gz
4.4 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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