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Sample GSM45679 Query DataSets for GSM45679
Status Public on Aug 01, 2005
Title Sham Day 5,# 2
Sample type RNA
Source name olfactory epithelium tissue
Organism Mus musculus
Extracted molecule total RNA
Description Male C57Bl/6 mice (6 week old) were sham-operated and olfactory epithelium tissue collected 5 days post-operation. Total RNA was extracted from the olfactory epithelium tissue. Total RNA (5µg each) was pooled from 3 mice. Target cRNA was prepared and hybridized to Mouse Genome U74Av2 GeneChip (GPL81) as per standard, commercially available Affymetrix GeneChips protocol.
Keywords = olfaction
Keywords = neurogenesis
Keywords = apoptosis
Keywords = gene silencing
Keywords = microarray, transcription factor
Submission date Mar 22, 2005
Last update date Oct 28, 2005
Contact name Ranjit S Shetty
Fax 859-323-1070
Organization name University of Kentucky
Department Physiology
Street address 800 Rose Street
City Lexington
State/province KY
ZIP/Postal code 40506
Country USA
Platform ID GPL81
Series (1)
GSE2437 Transcriptional changes during neuronal death and replacement in the adult olfactory epithelium

Data table header descriptions
ID_REF Affymetrix gene ID
VALUE 'signal' a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call

Data table
AFFX-MurIL2_at 59.6 A 0.843268
AFFX-MurIL10_at 42.8 A 0.51489
AFFX-MurIL4_at 98.8 A 0.062929
AFFX-MurFAS_at 129.9 A 0.185131
AFFX-BioB-5_at 1140.4 P 0.020022
AFFX-BioB-M_at 1583.7 P 0.000127
AFFX-BioB-3_at 886.7 P 0.000754
AFFX-BioC-5_at 2155 P 0.000972
AFFX-BioC-3_at 1701 P 0.00011
AFFX-BioDn-5_at 2485.2 P 0.000095
AFFX-BioDn-3_at 13951.8 P 0.000446
AFFX-CreX-5_at 24704.8 P 0.00006
AFFX-CreX-3_at 36662.8 P 0.000044
AFFX-BioB-5_st 270.8 A 0.287743
AFFX-BioB-M_st 252.3 A 0.631562
AFFX-BioB-3_st 158.3 A 0.772364
AFFX-BioC-5_st 52.6 A 0.897835
AFFX-BioC-3_st 22.6 A 0.834139
AFFX-BioDn-5_st 586.9 A 0.216524
AFFX-BioDn-3_st 333.8 A 0.216524

Total number of rows: 12488

Table truncated, full table size 328 Kbytes.

Supplementary file Size Download File type/resource
GSM45679.CEL.gz 2.9 Mb (ftp)(http) CEL
GSM45679.EXP.gz 476 b (ftp)(http) EXP
GSM45679.txt.gz 95.8 Kb (ftp)(http) TXT

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