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Sample GSM501083 Query DataSets for GSM501083
Status Public on Dec 31, 2010
Title IND1MSCH RMA
Sample type RNA
 
Source name MESEMCHYME
Organism Cervus elaphus
Characteristics individual: 1
age: 4
sampling method: SURGERY
tissue: mesemchyme
Treatment protocol no treatments
Extracted molecule total RNA
Extraction protocol samples from pedicle and frontal skin were extracted using 4mm biopsy punches while samples from velvet and mesenchyme were extracted after section of the antler tip. Animals were in all cases anesthetized
Label biotin
Label protocol Affymetrix standard protocols and reactives
 
Hybridization protocol Affymetrix standard protocols
Scan protocol Affymetrix standard protocols
Description none
Data processing CEL files were processed using R. Processing following MAS5, GCRMA, RMA, and Dchip methodologies
 
Submission date Jan 25, 2010
Last update date Dec 31, 2010
Contact name Manuel Nieto-Diaz
E-mail(s) mnietod@sescam.jccm.es
Organization name Hospital Nacional de Parapléjicos (SESCAM)
Department Unidad de Neurología Experimental
Lab Grupo de Investigación en NeuroRegeneración Espontánea
Street address Finca La Peraleda s/n
City Toledo
State/province Toledo
ZIP/Postal code 45071
Country Spain
 
Platform ID GPL570
Series (1)
GSE20036 Gene Expression Analysis of Deer Antler
Relations
Reanalysis of GSM501071
Reanalysis of GSM501095
Reanalysis of GSM501107

Data table header descriptions
ID_REF
VALUE normalized signal

Data table
ID_REF VALUE
1007_s_at 5.478347134
1053_at 3.718333707
117_at 5.702529436
121_at 6.666404567
1255_g_at 3.277588077
1294_at 4.549107674
1316_at 5.124344164
1320_at 5.107331856
1405_i_at 2.804766115
1431_at 2.956315611
1438_at 6.156629431
1487_at 7.381085595
1494_f_at 5.174118201
1552256_a_at 5.685533902
1552257_a_at 5.558505548
1552258_at 2.921969864
1552261_at 5.147617407
1552263_at 2.795408203
1552264_a_at 4.867225011
1552266_at 2.471634223

Total number of rows: 54675

Table truncated, full table size 1212 Kbytes.




Supplementary file Size Download File type/resource
GSM501083.CEL.gz 4.2 Mb (ftp)(http) CEL
Processed data included within Sample table

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