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Sample GSM501107 Query DataSets for GSM501107
Status Public on Dec 31, 2010
Title IND1MSCH DChip
Sample type RNA
 
Source name MESEMCHYME
Organism Cervus elaphus
Characteristics individual: 1
age: 4
sampling method: SURGERY
tissue: mesemchyme
Treatment protocol no treatments
Extracted molecule total RNA
Extraction protocol samples from pedicle and frontal skin were extracted using 4mm biopsy punches while samples from velvet and mesenchyme were extracted after section of the antler tip. Animals were in all cases anesthetized
Label biotin
Label protocol Affymetrix standard protocols and reactives
 
Hybridization protocol Affymetrix standard protocols
Scan protocol Affymetrix standard protocols
Description none
Data processing CEL files were processed using R. Processing following MAS5, GCRMA, RMA, and Dchip methodologies
 
Submission date Jan 25, 2010
Last update date Dec 31, 2010
Contact name Manuel Nieto-Diaz
E-mail(s) mnietod@sescam.jccm.es
Organization name Hospital Nacional de Parapléjicos (SESCAM)
Department Unidad de Neurología Experimental
Lab Grupo de Investigación en NeuroRegeneración Espontánea
Street address Finca La Peraleda s/n
City Toledo
State/province Toledo
ZIP/Postal code 45071
Country Spain
 
Platform ID GPL570
Series (1)
GSE20036 Gene Expression Analysis of Deer Antler
Relations
Reanalysis of GSM501095
Reanalysis of GSM501071
Reanalysis of GSM501083

Data table header descriptions
ID_REF
VALUE normalized signal

Data table
ID_REF VALUE
1007_s_at 246.2761954
1053_at 164.692044
117_at 227.8883302
121_at 429.3878923
1255_g_at 125.3134262
1294_at 124.5901238
1316_at 241.9456529
1320_at 146.8664622
1405_i_at 83.59261611
1431_at 124.6579718
1438_at 192.6281938
1487_at 272.2045804
1494_f_at 125.4661666
1552256_a_at 187.6663826
1552257_a_at 248.2103384
1552258_at 138.2784505
1552261_at 290.8006138
1552263_at 95.75530326
1552264_a_at 143.4642521
1552266_at 94.91046247

Total number of rows: 54675

Table truncated, full table size 1212 Kbytes.




Supplementary file Size Download File type/resource
GSM501107.CEL.gz 4.2 Mb (ftp)(http) CEL
Processed data included within Sample table

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