GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM50187
Query DataSets for GSM50187
Status
Public on Jul 02, 2005
Title
HCC-2998
Sample type
genomic
Source name
NCI60
Organism
Homo sapiens
Extracted molecule
genomic DNA
Description
colon cancer cell line
Submission date
May 03, 2005
Last update date
Nov 15, 2005
Contact name
William R. Sellers
E-mail(s)
William_Sellers@dfci.harvard.edu
Phone
617-632-5261
Fax
617-632-5417
URL
http://research.dfci.harvard.edu/sellerslab/index.html
Organization name
Dana-Farber Cancer Institute
Department
Medical Oncology
Lab
Sellers Lab
Street address
44 Binney Street
City
Boston
State/province
MA
ZIP/Postal code
02115
Country
USA
Platform ID
GPL2014
Series (1)
GSE2520
Affymetrix 100K SNP array data-
Data table header descriptions
ID_REF
Affymetrix SNPID
VALUE
Genotypes: 0==AA, 1==AB, 2==BB, -1==NC
pValue
detection P-value
MedianS
Median Signal
RAS1
Relative allele signal for the data in the first probe group
RAS2
Relative allele signal for the data in the second probe group
Data table
ID_REF
VALUE
pValue
MedianS
RAS1
RAS2
157
0
0.000488
22.901
1.000000
1.000000
1546
2
0.000488
10.178
0.109134
0.000259
2144
2
0.000488
14.634
0.000000
0.001332
2249
0
0.000488
17.582
0.983691
1.000000
2279
0
0.000488
20.634
0.953197
1.000000
2399
1
0.000488
9.620
0.515240
0.640186
2403
0
0.000488
17.885
1.000000
0.940936
2451
1
0.000488
11.224
0.501069
0.557006
2613
1
0.011719
12.695
0.429874
0.390211
2839
1
0.000488
14.378
0.451135
0.428608
2841
2
0.001465
16.169
0.117410
0.060679
2928
2
0.000488
12.769
0.000000
0.080602
2998
2
0.000488
19.687
0.033771
0.000000
3117
0
0.005859
19.622
1.000000
1.000000
3533
1
0.000488
14.199
0.371162
0.434088
3534
-1
0.113281
4.594
0.457342
0.420214
3847
0
0.000488
11.761
1.000000
0.873536
3849
0
0.000488
22.019
1.000000
1.000000
4034
2
0.003906
10.486
0.157980
0.000000
4363
0
0.000488
13.882
0.926587
1.000000
Total number of rows:
63378
Table truncated, full table size
2686 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM50187.CEL.gz
19.4 Mb
(ftp)
(http)
CEL
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
