|
Status |
Public on Mar 05, 2011 |
Title |
Genotyping data from one patient with unexplained mental retardation and a deletion in 15q13 (patient 1) |
Sample type |
genomic |
|
|
Source name |
whole blood from patient
|
Organism |
Homo sapiens |
Characteristics |
cell type: whole blood from patient
|
Extracted molecule |
genomic DNA |
Extraction protocol |
Standard DNA isolation Kit from whole blood with promega maxwell-technology.
|
Label |
biotin
|
Label protocol |
Standard Affymetrix protocol
|
|
|
Hybridization protocol |
Standard Affymetrix protocol
|
Scan protocol |
Standard Affymetrix protocol
|
Description |
Genotyping data from patients with unexplained mental retardation
|
Data processing |
We identified genome-wide CNV using Affymetrix Genotyping Console (GTC), which uses a Hidden Markov Model (HMM) algorithm to calculate copy numbers.
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|
|
Submission date |
Feb 05, 2010 |
Last update date |
Mar 05, 2011 |
Contact name |
Michael Bonin |
Organization name |
University Tuebingen
|
Department |
Medical Genetics
|
Lab |
Microarray Facility
|
Street address |
CAlwerstr. 7
|
City |
Tuebingen |
State/province |
BW |
ZIP/Postal code |
72076 |
Country |
Germany |
|
|
Platform ID |
GPL6801 |
Series (1) |
GSE20564 |
Genotyping data from one patient with unexplained mental retardation and a deletion in 15q13 |
|