|
| Status |
Public on Apr 12, 2010 |
| Title |
D3B |
| Sample type |
RNA |
| |
|
| Source name |
H9 human embryonic stem cells
|
| Organism |
Homo sapiens |
| Characteristics |
agent: Noggin + SB431542
time point: D3
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Cells were lysed in Trizol LS and standard protocol was used for RNA extraction
|
| Label |
biotin
|
| Label protocol |
Standard Illumina protocol
|
| |
|
| Hybridization protocol |
Standard Illumina protocol
|
| Scan protocol |
Standard Illumina protocol
|
| Description |
D3B
|
| Data processing |
Array data from BeadStudio was processed using a variance stabilizing transformation and quantile normalization with the LUMI package for Bioconductor in R.
|
| |
|
| Submission date |
Mar 01, 2010 |
| Last update date |
Apr 12, 2010 |
| Contact name |
Stuart M Chambers |
| Organization name |
Sloan-Kettering Institute
|
| Street address |
1270 York Ave
|
| City |
New York |
| State/province |
NY |
| ZIP/Postal code |
10021 |
| Country |
USA |
| |
|
| Platform ID |
GPL6102 |
| Series (1) |
| GSE20573 |
Specification of functional floor plate tissue from human embryonic stem cells occurs at the expense of anterior neurectoderm |
|
