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Sample GSM522407 Query DataSets for GSM522407
Status Public on Dec 31, 2010
Title B3K_T2
Sample type RNA
Source name kidney
Organism Homo sapiens
Characteristics tissue: tumor
Extracted molecule total RNA
Extraction protocol Trizol
Label biotin
Label protocol standard Affy protocol
Hybridization protocol standard Affy protocol
Scan protocol standard Affy protocol
Description Renal tumor, technical replicate 2
Data processing GCRMA processed data utilizing custom CDF-files for Ensembl genes (R package hs133phsensg).
Submission date Mar 15, 2010
Last update date Dec 31, 2010
Contact name Sakari Vanharanta
Organization name University of Helsinki
Department Translational Cancer Medicine Program
Lab Vanharanta
Street address Haartmaninkatu 8
City Helsinki
ZIP/Postal code 00014
Country Finland
Platform ID GPL10184
Series (1)
GSE20896 Gene expression profile of HLRCC associated renal cell cancer

Data table header descriptions

Data table
AFFX-BioB-3_at 7.970529558
AFFX-BioB-5_at 8.068631424
AFFX-BioB-M_at 8.66514666
AFFX-BioC-3_at 10.24059997
AFFX-BioC-5_at 9.266409269
AFFX-BioDn-3_at 11.95712311
AFFX-BioDn-5_at 11.75588927
AFFX-CreX-3_at 14.47525586
AFFX-CreX-5_at 14.66234553
AFFX-DapX-3_at 9.013626775
AFFX-DapX-5_at 8.064866146
AFFX-DapX-M_at 9.071450297
AFFX-HSAC07/X00351_3_at 14.31104081
AFFX-HSAC07/X00351_5_at 12.82981357
AFFX-HSAC07/X00351_M_at 13.33786641
AFFX-HUMGAPDH/M33197_3_at 15.02709914
AFFX-HUMGAPDH/M33197_5_at 14.99117742
AFFX-HUMGAPDH/M33197_M_at 14.90348473
AFFX-HUMISGF3A/M97935_3_at 10.50368999
AFFX-HUMISGF3A/M97935_5_at 8.313306041

Total number of rows: 27728

Table truncated, full table size 867 Kbytes.

Supplementary file Size Download File type/resource
GSM522407.CEL.gz 4.7 Mb (ftp)(http) CEL
Processed data included within Sample table

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