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Sample GSM5293532 Query DataSets for GSM5293532
Status Public on Feb 18, 2022
Title 10X Adult SVZ 01
Sample type SRA
 
Source name brain
Organism Mus musculus
Characteristics age: Adult
Extracted molecule total RNA
Extraction protocol Single-cell suspensions were processed through Chromium 10X to generate single-cell cDNA libraries attached to microbeads
Microbeads were counted, and amplified by PCR, and the 3' end of the cDNA prepared for sequencing using a modified Nextera XT protocol
 
Library strategy RNA-Seq
Library source transcriptomic
Library selection cDNA
Instrument model Illumina NovaSeq 6000
 
Description 10X Adult SVZ 01
Data processing Raw sequencing data was processed through 10X Genomics CellRanger v3.0.2 using default parameters to obtain the gene expression matrices
Genome_build: mm10
Supplementary_files_format_and_content: mtx matrix files
 
Submission date May 13, 2021
Last update date Feb 18, 2022
Contact name Steve Potter
Organization name Cincinnati Children's Hospital Research Foundation
Department Developmental Biology
Street address 240 Albert Sabin Way
City Cincinnati
State/province Ohio
ZIP/Postal code 45229
Country USA
 
Platform ID GPL24247
Series (1)
GSE174392 Olig2 Defines a Unique Subset of Neural Stem Cells That Produce Specific Olfactory Bulb Interneuron Subtypes in the Subventricular Zone of Postnatal and Adult Mice
Relations
BioSample SAMN19156825
SRA SRX10867472

Supplementary file Size Download File type/resource
GSM5293532_Adult-SVZ-01-barcodes.tsv.gz 20.0 Mb (ftp)(http) TSV
GSM5293532_Adult-SVZ-01-features.tsv.gz 250.8 Kb (ftp)(http) TSV
GSM5293532_Adult-SVZ-01-matrix.mtx.gz 171.4 Mb (ftp)(http) MTX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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