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Sample GSM5318927 Query DataSets for GSM5318927
Status Public on May 18, 2021
Title human_OE_rep3
Sample type genomic
 
Source name human osteoarthritis cell rep3
Organism Homo sapiens
Characteristics cell type: human osteoarthritis cell
Extracted molecule genomic DNA
Extraction protocol genomic DNA was extracted and purified from LBC samples using Qiagen DNeasy Kit according to standard instructions
Label Cy5 and Cy3
Label protocol Standard Illumina Protocol
 
Hybridization protocol bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human MethylationEPIC(850K) BeadChip using standard Illumina protocol
Scan protocol Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
Data processing BeadStudio software v3.2
 
Submission date May 17, 2021
Last update date May 18, 2021
Contact name sun tong xin
E-mail(s) tongxin.sun@oebiotech.com
Organization name oebiotech
Street address xinjunhuanlu
City shanghai
ZIP/Postal code 201100
Country China
 
Platform ID GPL21145
Series (1)
GSE174525 DNA methylation in osteoarthritis

Data table header descriptions
ID_REF
VALUE Average Beta

Data table
ID_REF VALUE
cg07881041 0.921351229
cg03513874 0.622770029
cg05451842 0.022464602
cg14797042 0.953287594
cg09838562 0.019042685
cg25458538 0.944284572
cg09261072 0.42755532
cg02404579 0.783144007
cg04118974 0.918974529
cg01236347 0.259984794
cg22585117 0.663518979
cg25552317 0.95495469
cg23875663 0.181400589
cg07659892 0.030146708
cg15995909 0.956199751
cg23728960 0.105154102
cg11993619 0.414189247
cg01925883 0.03281999
cg03452160 0.046485566
cg09430819 0.555641115

Total number of rows: 746383

Table truncated, full table size 16682 Kbytes.




Supplementary file Size Download File type/resource
GSM5318927_204776820051_R04C01_Grn.idat.gz 6.8 Mb (ftp)(http) IDAT
GSM5318927_204776820051_R04C01_Red.idat.gz 6.8 Mb (ftp)(http) IDAT
Processed data included within Sample table

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