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Sample GSM533388 Query DataSets for GSM533388
Status Public on Nov 05, 2010
Title Gene expression: BT474
Sample type RNA
Source name RNA from breast cancer cell line
Organism Homo sapiens
Characteristics cell line: BT474
catalog number: ATCC# HTB-20
Extracted molecule total RNA
Extraction protocol standard Affymetrix protocol
Label standard Affymetrix protocol
Label protocol standard Affymetrix protocol
Hybridization protocol standard Affymetrix protocol
Scan protocol standard Affymetrix protocol
Description Data obtained from caBIG (
Breast cancer cell line, ATCC# HTB-20
Data processing RMA normalized
Submission date Apr 14, 2010
Last update date Nov 05, 2010
Contact name Raj Chari
Organization name BC Cancer Research Centre
Department Cancer Genetics and Developmental Biology
Lab Wan Lam Lab
Street address 675 West 10th Avenue
City Vancouver
State/province BC
ZIP/Postal code V5Z 1L3
Country Canada
Platform ID GPL570
Series (2)
GSE17768 An integrative multi-dimensional genetic and epigenetic strategy to identify aberrant genes and pathways in cancer: gene expression
GSE21541 An integrative multi-dimensional genetic and epigenetic strategy to identify aberrant genes and pathways in cancer

Data table header descriptions
VALUE RMA Normalized Expression Value

Data table
1007_s_at 10.9479728 P
1053_at 9.906037036 P
117_at 5.884062224 A
121_at 9.239334399 P
1255_g_at 3.798849164 A
1294_at 5.67721758 A
1316_at 6.485843216 P
1320_at 5.855519809 A
1405_i_at 4.629324164 A
1431_at 4.874809938 A
1438_at 8.733867224 P
1487_at 9.076133243 P
1494_f_at 6.588720645 M
1552256_a_at 7.961577468 P
1552257_a_at 10.4009835 P
1552258_at 5.437784125 A
1552261_at 5.931112739 A
1552263_at 5.791000269 M
1552264_a_at 8.257601969 P
1552266_at 5.386509107 A

Total number of rows: 54675

Table truncated, full table size 1318 Kbytes.

Supplementary file Size Download File type/resource
GSM533388_BT474_brst_SS117188_HG_U133_Plus_2_HCHP_85191_.CEL.gz 5.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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