|
Status |
Public on Jun 22, 2023 |
Title |
Patient24 meningioma |
Sample type |
genomic |
|
|
Source name |
meningioma
|
Organism |
Homo sapiens |
Characteristics |
prior sample id: 351 Sex: MALE age: 24 who grade: II reoperation: No progression: No
|
Extracted molecule |
genomic DNA |
Extraction protocol |
Tumor/dura samples were obtained at the time of surgery. DNA was extracted using Qiagen DNeasy Blood & Tissue Kit (Cat No./ID: 69506).
|
Label |
Cy5 and Cy3
|
Label protocol |
standard Illumina HumanOmni-Express v12.1 BeadChip SNP array protocol
|
|
|
Hybridization protocol |
standard Illumina HumanOmni-Express v12.1 BeadChip SNP array protocol
|
Scan protocol |
Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
|
Description |
meningioma
|
Data processing |
Data were analyzed in Illumina GenomeStudio v2.0.5 with cnvPartition Plug-in v3.2.1 Genotype: AA,AB,BB,or NC (no call)
|
|
|
Submission date |
Jun 09, 2021 |
Last update date |
Jun 22, 2023 |
Contact name |
Michelle Ariana Wedemeyer |
E-mail(s) |
michelle.ariana.wedemeyer@gmail.com
|
Organization name |
University of Southern California
|
Department |
Neurosurgery
|
Street address |
1200 N State St, Suite 3300
|
City |
Los Angeles |
State/province |
California |
ZIP/Postal code |
90033 |
Country |
USA |
|
|
Platform ID |
GPL18900 |
Series (2) |
GSE176457 |
DNA Methylation Signatures Differentiate Meningiomas from Normal Dura [OmniSNP] |
GSE178143 |
DNA Methylation Signatures Differentiate Meningiomas from Normal Dura |
|