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Sample GSM5368716 Query DataSets for GSM5368716
Status Public on Dec 31, 2022
Title GAS_132
Sample type genomic
 
Source name PBMC
Organism Homo sapiens
Characteristics alive: 0
Extracted molecule genomic DNA
Extraction protocol High-quality DNA from PBMCs was extracted
prepared using standard protocols (Bisulfite conversion Qiagen, hybridization, and Infinium Methylation Assay Illumina)
Label cy3,cy5
Label protocol Illumina protcol
 
Hybridization protocol Illumina protcol
Scan protocol Illumina protcol
Data processing R package minfi was used to transform the raw data
normalized and generate M value
hg19
 
Submission date Jun 10, 2021
Last update date Dec 31, 2022
Contact name Ivana Yang
E-mail(s) IVANA.YANG@CUANSCHUTZ.EDU
Organization name University of Colorado
Street address 1635 Aurora Ct
City Aurora
State/province CO
ZIP/Postal code 80045
Country USA
 
Platform ID GPL21145
Series (1)
GSE176529 Identification of Early and Intermediate Biomarkers for Acute respiratory distress syndrome (ARDS) Mortality by Multi-Omic Approaches

Data table header descriptions
ID_REF
VALUE normalized M Values for each sample

Data table
ID_REF VALUE
cg14817997 1.64001453159583
cg26928153 2.40660782681134
cg16269199 1.21971762160755
cg13869341 2.4869418101841
cg14008030 0.0148476981539704
cg12045430 -0.978576718067455
cg20826792 -0.346927817615596
cg20253340 0.441607968079479
cg02404219 3.20749966637191
cg21870274 1.42096232078992
cg03130891 -3.44775709878529
cg04098293 1.30703651090956
cg16382250 2.25692411507125
cg24335620 1.67755935859509
cg22463138 1.63073826316265
cg16162899 3.02707339810879
cg01803908 1.9328482273064
cg17149495 1.48971967102139
cg22802167 3.05655448246901
cg24669183 2.15093780980545

Total number of rows: 814207

Table truncated, full table size 22575 Kbytes.




Supplementary file Size Download File type/resource
GSM5368716_GAS_132_Grn.idat.gz 7.1 Mb (ftp)(http) IDAT
GSM5368716_GAS_132_Red.idat.gz 7.1 Mb (ftp)(http) IDAT
Processed data included within Sample table
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