GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM56
Query DataSets for GSM56
Status
Public on Jul 30, 2001
Title
mouse_hindlimb
Sample type
SAGE
Anchor
NlaIII
Tag Count
68450
Tag Length
10
Source name
E11.5 intact developing B6C3H hindlimbs
Organism
Mus musculus
Extracted molecule
total RNA
Description
SAGE expression profiles define unique
patterns of transcription between developing
forelimbs and hindlimbs.
Submission date
Jun 04, 2001
Last update date
Nov 19, 2008
Contact name
Elliott H Margulies
E-mail(s)
elliott@nhgri.nih.gov
Phone
301-594-9210
Organization name
National Human Genome Research Institute
Department
Genome Technology Branch
Lab
Dr. Eric Green
Street address
City
Bethesda
State/province
MD
ZIP/Postal code
20892
Country
USA
Platform ID
GPL11
Series (1)
GSE504
Comparative molecular analysis of developing mouse forelimbs and hindlimbs
Data table header descriptions
TAG
phred analyzed sequence data
COUNT
excludes linker sequences (0.64% of total)
TPM
tags per million
Data table
TAG
COUNT
TPM
CAGAGACAAG
1
14.61
TGTAGTGTAA
180
2629.66
CTGGAGATGG
6
87.66
GCTGAGGCGC
3
43.83
AGAGCGAAGT
322
4704.16
TCGTGATTGT
60
876.55
CAGAAACAGA
3
43.83
AGTTCTTCCA
6
87.66
AAGGCAAAGA
90
1314.83
AAACCCTTAA
3
43.83
TGTTTCCTAT
4
58.44
GCCGGGTTAG
1
14.61
GTGGAGAACT
5
73.05
TTTAATGAAA
2
29.22
TTTAATAAAG
325
4747.99
GCAGCGATTC
23
336.01
CAAGTGCGGA
1
14.61
CCAGAGGACT
24
350.62
TAAGTGCGGA
79
1154.13
CCCAAGGACA
6
87.66
Total number of rows:
22329
Table truncated, full table size
416 Kbytes
.
Supplementary data files not provided
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
