|
| Status |
Public on Feb 04, 2022 |
| Title |
HPAP Case 13 |
| Sample type |
genomic |
| |
|
| Source name |
tumor sample
|
| Organism |
Homo sapiens |
| Characteristics |
age: 14
sex predicted: F
os months: 11
os status (0=alive, 1=deceased): 0
material: FFPE
tissue: high-grade glioma with pleomorphic and pseudopapillary features (HPAP)
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
genomic DNA was bisulfite-converted with the EZ DNA Methylation Kitm (Zymo Research D5001)
|
| Label |
Cy5 and Cy3
|
| Label protocol |
standard Illumina protocol
|
| |
|
| Hybridization protocol |
standard Illumina protocol
|
| Scan protocol |
Illumina iScan System according to the manufacturer's protocol
|
| Description |
Tumor
|
| Data processing |
R package meffil v1.3.1
|
| |
|
| Submission date |
Jan 27, 2022 |
| Last update date |
Feb 05, 2022 |
| Contact name |
Drew Pratt |
| E-mail(s) |
drew.pratt@nih.gov
|
| Organization name |
National Institutes of Health
|
| Department |
Laboratory of Pathology
|
| Street address |
10 Center Drive, Building 10, Room 2S235
|
| City |
Bethesda |
| State/province |
Maryland |
| ZIP/Postal code |
20892 |
| Country |
USA |
| |
|
| Platform ID |
GPL21145 |
| Series (1) |
| GSE195567 |
DNA methylation array analysis of high-grade gliomas with pleomorphic and pseudopapillary features |
|
