|
Status |
Public on Dec 31, 2023 |
Title |
Malignant Pleural Mesothelioma cell line 23 |
Sample type |
genomic |
|
|
Source name |
Malignant Pleural Mesothelioma
|
Organism |
Homo sapiens |
Characteristics |
gender: Male age: 54 histology: Sarcomatoid Desmoplastic
|
Treatment protocol |
None
|
Growth protocol |
Malignant Pleural Mesothelioma cell lines growth protocol is described in Quetel et al, Molecular oncology, 2020, doi:10.1002/1878-0261.12651.
|
Extracted molecule |
genomic DNA |
Extraction protocol |
Genomic DNA was extracted using a standard isopropanol precipitation procedure.
|
Label |
C-Bio and A-DNP
|
Label protocol |
Standard Illumina protocol.
|
|
|
Hybridization protocol |
Standard Illumina protocol.
|
Scan protocol |
Standard Illumina protocol.
|
Description |
Genomic DNA extracted from Malignant Pleural Mesothelioma cell line was genotyped using HumanOmniExpress-24 v1.0 BeadChip (Illumina). MPM_23
|
Data processing |
Standard Illumina protocol using BeadStudio software. All samples have a call rate higher than 0.95 except MPM_49 with a call rate of 0.75. Genotype: AA,AB,BB
|
|
|
Submission date |
Feb 23, 2022 |
Last update date |
Dec 31, 2023 |
Contact name |
Sandrine Imbeaud |
E-mail(s) |
sandrine.imbeaud@inserm.fr
|
Organization name |
Centre de Recherche des Cordeliers
|
Department |
INSERM UMRS1138-EQUIPE 28, Sorbonne Université-Inserm-Université de Paris
|
Lab |
FUNctional GEnomics of Solid Tumors - FunGeST
|
Street address |
15 rue de l'Ecole de Médecine
|
City |
Paris |
ZIP/Postal code |
75006 |
Country |
France |
|
|
Platform ID |
GPL21168 |
Series (1) |
GSE197288 |
Genotyping of Malignant Pleural Mesothelioma primary cell lines by SNP array |
|