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Sample GSM66712 Query DataSets for GSM66712
Status Public on Jul 30, 2005
Title Human HL-60 cells exposed to 2.45 GHz radiofrequency for 2 hours
Sample type SAGE
Anchor NlaIII
Tag Count 51916
Tag Length 10
 
Source name HL-60 cells exposed 2 hours
Organism Homo sapiens
Characteristics 2.45 GHz radiofrequency fields alter gene expression in clutured human cells.
Treatment protocol Human HL-60 cells were exposed to 2.45 GHz radiofrequency for 2 hours
Extracted molecule polyA RNA
 
Description The biological effect of radiofrequency (RF) fields remains controversial. We address this issue by examining whether RF fields can cause changes in gene expression. We used the pulsed RF fields at a frequency of 2.45 GHz that is commonly used in telecommunication to expose cultured human HL-60 cells. We used the SAGE (serial analysis of gene expression) method to measure the RF effect on gene expression at the genome level. We observed that 221 genes altered their expression after a 2-hour exposure. The number of affected genes increased to 759 after a 6-hour exposure. Functional classification of the affected genes reveals that apoptosis-related genes were among the up-regulated ones and the cell cycle genes among the down-regulated ones. We observed no significant increase in the expression of heat shock genes. These results indicate that the RF fields at 2.45 GHz can alter gene expression in cultured human cells through non-thermal mechanism.
FEBS LETTERS, 2005 (in press)
 
Submission date Jul 28, 2005
Last update date Nov 19, 2008
Contact name San Ming Wang
E-mail(s) swang1@northwestern.edu
Phone 224-364-7491
Fax 224-364-5003
Organization name ENH Research Institute, Northwestern University
Department Center for Functional Genomics
Street address 1001 University Place
City Evanston
State/province IL
ZIP/Postal code 60062
Country USA
 
Platform ID GPL4
Series (1)
GSE3025 2.45 GHz Radiofrequency fields alter gene expression in cultured human cells

Data table header descriptions
TAG
COUNT Absolute tag count
TPM tags per million

Data table
TAG COUNT TPM
CCCATCGTCC 1141 21977.81
GGATTTGGCC 719 13849.30
AAGACAGTGG 637 12269.82
GAGGGAGTTT 626 12057.94
TGCACGTTTT 588 11325.99
GCTCCCCTTT 562 10825.18
AGCTCTCCCT 549 10574.77
TTGGTCCTCT 484 9322.75
GTGAAACCCC 440 8475.23
CCCCAGCCAG 409 7878.11
CCACTGCACT 377 7261.73
CCCTGGGTTC 366 7049.85
AGGAAAGCTG 341 6568.30
ATGGCTGGTA 301 5797.83
CGCTGGTTCC 294 5662.99
CCTGTAATCC 292 5624.47
GTGAAGGCAG 287 5528.16
CACCTAATTG 272 5239.23
AGGCTACGGA 244 4699.90
AAGCGGCCGC 242 4661.38

Total number of rows: 15487

Table truncated, full table size 289 Kbytes.




Supplementary data files not provided

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