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Sample GSM66902 Query DataSets for GSM66902
Status Public on Jan 31, 2006
Title CD4T replicate 2
Sample type RNA
 
Source name Splenic CD4 T cells
Organism Mus musculus
Characteristics Wild type, C57BL/6, spleen CD4 T cells, CD3+CD4+NK1.1-
Extracted molecule total RNA
Extraction protocol Approximately 100,000 wild-type CD4 splenic T cells were sorted. Total RNA was extracted from the sorted cells using TRIZOL.
Label biotin
Label protocol Approximately 2 µg of amplified RNA was processed to produce biotinylated cRNA targets.
 
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures
Description Wild type, C57BL/6, spleen CD4 T cells, CD3+CD4+NK1.1-
Data processing RMA
 
Submission date Aug 01, 2005
Last update date Aug 22, 2005
Contact name CBDM Lab
E-mail(s) cbdm@hms.harvard.edu
Phone 617-432-7747
Organization name Harvard Medical School
Department Microbiology and Immunobiology
Lab CBDM
Street address 77 Avenue Louis Pasteur
City Boston
State/province MA
ZIP/Postal code 02215
Country USA
 
Platform ID GPL81
Series (1)
GSE3039 Innate vs. adaptive lymphocyte gene expression

Data table header descriptions
ID_REF
VALUE RMA-calculated Signal intensity

Data table
ID_REF VALUE
100001_at 377.6669917
100002_at 28.33650265
100003_at 15.79747508
100004_at 97.76372705
100005_at 73.75145471
100006_at 11.38690058
100007_at 111.7260879
100009_r_at 9.260056966
100010_at 123.0708889
100011_at 735.1991402
100012_at 3015.423608
100013_at 218.2299221
100014_at 51.86274684
100015_at 18.54022677
100016_at 29.18579459
100017_at 26.56767594
100018_at 133.4456089
100019_at 41.93320821
100020_at 94.24884966
100021_at 15.62829329

Total number of rows: 12488

Table truncated, full table size 267 Kbytes.




Supplementary file Size Download File type/resource
GSM66902.CEL.gz 2.7 Mb (ftp)(http) CEL

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