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Sample GSM66909 Query DataSets for GSM66909
Status Public on Jan 31, 2006
Title CD8abT replicate 3
Sample type RNA
 
Source name RTOC CD8abT cells
Organism Mus musculus
Characteristics CD8 alpha beta RTOC cells selected by low-dose agonist (100 nM Smcy). TCRb+CD8a+CD8b+
Extracted molecule total RNA
Extraction protocol Approximately 50,000 CD8ab T cells were sorted. Total RNA was extracted from the sorted cells using TRIZOL.
Label biotin
Label protocol Approximately 2 µg of amplified RNA was processed to produce biotinylated cRNA targets.
 
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures
Description CD8 alpha beta RTOC cells selected by low-dose agonist (100 nM Smcy). TCRb+CD8a+CD8b+
Data processing RMA
 
Submission date Aug 01, 2005
Last update date Aug 22, 2005
Contact name CBDM Lab
E-mail(s) cbdm@hms.harvard.edu
Phone 617-432-7747
Organization name Harvard Medical School
Department Microbiology and Immunobiology
Lab CBDM
Street address 77 Avenue Louis Pasteur
City Boston
State/province MA
ZIP/Postal code 02215
Country USA
 
Platform ID GPL81
Series (1)
GSE3039 Innate vs. adaptive lymphocyte gene expression

Data table header descriptions
ID_REF
VALUE RMA-calculated Signal intensity

Data table
ID_REF VALUE
100001_at 932.3664372
100002_at 16.94190008
100003_at 11.38175676
100004_at 38.14176206
100005_at 53.16704516
100006_at 10.07073542
100007_at 79.11758611
100009_r_at 7.071630981
100010_at 28.30774903
100011_at 636.4520624
100012_at 1181.464252
100013_at 376.7069002
100014_at 16.56235728
100015_at 14.97247796
100016_at 23.79268013
100017_at 14.73167829
100018_at 94.90915502
100019_at 30.07412934
100020_at 75.75085081
100021_at 12.13202071

Total number of rows: 12488

Table truncated, full table size 266 Kbytes.




Supplementary file Size Download File type/resource
GSM66909.CEL.gz 2.7 Mb (ftp)(http) CEL

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