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| Status |
Public on Jan 31, 2006 |
| Title |
B1 replicate 2 |
| Sample type |
RNA |
| |
|
| Source name |
Peritoneal B1-B cells
|
| Organism |
Mus musculus |
| Characteristics |
Wild type, C57BL/6, Peritoneal B1-B cells, IgM(hi)IgD(int)CD11b+
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Approximately 100,000 B1-B cells were sorted. Total RNA was extracted from the sorted cells using TRIZOL.
|
| Label |
biotin
|
| Label protocol |
Approximately 2 µg of amplified RNA was processed to produce biotinylated cRNA targets.
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| |
|
| Hybridization protocol |
standard Affymetrix procedures
|
| Scan protocol |
standard Affymetrix procedures
|
| Description |
Wild type, C57BL/6, Peritoneal B1-B cells, IgM(hi)IgD(int)CD11b+
|
| Data processing |
RMA
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| |
|
| Submission date |
Aug 01, 2005 |
| Last update date |
Aug 22, 2005 |
| Contact name |
CBDM Lab |
| E-mail(s) |
cbdm@hms.harvard.edu
|
| Phone |
617-432-7747
|
| Organization name |
Harvard Medical School
|
| Department |
Microbiology and Immunobiology
|
| Lab |
CBDM
|
| Street address |
77 Avenue Louis Pasteur
|
| City |
Boston |
| State/province |
MA |
| ZIP/Postal code |
02215 |
| Country |
USA |
| |
|
| Platform ID |
GPL81 |
| Series (1) |
| GSE3039 |
Innate vs. adaptive lymphocyte gene expression |
|
| Data table header descriptions |
| ID_REF |
|
| VALUE |
RMA-calculated Signal intensity |
| Data table |
| ID_REF |
VALUE |
| 100001_at |
29.14737284 |
| 100002_at |
43.79509512 |
| 100003_at |
204.8138391 |
| 100004_at |
193.1175777 |
| 100005_at |
107.3135462 |
| 100006_at |
13.96245037 |
| 100007_at |
156.5850998 |
| 100009_r_at |
14.79913285 |
| 100010_at |
121.6065786 |
| 100011_at |
564.5699967 |
| 100012_at |
546.2908495 |
| 100013_at |
242.2555951 |
| 100014_at |
56.15801777 |
| 100015_at |
35.43376253 |
| 100016_at |
44.79793474 |
| 100017_at |
28.45056513 |
| 100018_at |
161.5114228 |
| 100019_at |
66.03717434 |
| 100020_at |
74.23366785 |
| 100021_at |
25.04701108 |
Total number of rows: 12488
Table truncated, full table size 267 Kbytes.
| Supplementary file |
Size |
Download |
File type/resource |
| GSM66916.CEL.gz |
2.8 Mb |
(ftp)(http) |
CEL |
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