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Sample GSM6706772 Query DataSets for GSM6706772
Status Public on Aug 13, 2023
Title interscapular brown adipose tissue
Sample type RNA
Source name interscapular brown adipose tissue
Organism Mus musculus
Characteristics genotype: C57BL/6
Treatment protocol No treatment
Growth protocol 8-week-old male C57BL/6J mices are raised under room temperature
Extracted molecule total RNA
Extraction protocol Total RNA from each pooled sample was isolated using the TRIzol method for Affymetrix miRNA microarray analysis.
Label biotin
Label protocol Procedures were performed as described on the web site of CapitalBio.
Hybridization protocol Biotin-labelled miRNAs were used for hybridization on each miRNA microarray chip containing probes in triplicate.
Scan protocol standard Affymetrix protocol
Description interscapular brown adipose tissue from C57BL/6 mouse housed at room temperature
Data processing Raw data were normalized to U6 and analysed using GenePix Pro 4.0 software
Submission date Nov 03, 2022
Last update date Aug 13, 2023
Contact name Xiaohong Jiang
Organization name Nanjing University
Street address 163 Xianlin Rd.
City Nanjing
ZIP/Postal code 210000
Country China
Platform ID GPL14613
Series (1)
GSE217222 miRNA expression from mouse adipose tissues

Data table header descriptions
VALUE normalized signal

Data table
hp_mmu-mir-200c_st 60.93005
hp_mmu-mir-200a_st 13.65897
hp_mmu-mir-205_st 20.11937
hp_mmu-mir-470_st 20.49475
hp_mmu-mir-743a_st 21.01797
hp_mmu-mir-34c_st 49.39259
hp_mmu-mir-200b_st 17.47378
hp_mmu-mir-429_st 19.82294
mmu-miR-878-3p_st 17.83841
mmu-miR-202-3p_st 14.27718
mmu-miR-34c-star_st 31.85476
hp_mmu-mir-31_st 48.16257
hp_mmu-mir-449a_st 14.45688
mmu-miR-34b-3p_st 25.73437
hp_mmu-mir-741_st 17.89367
mmu-miR-465b-3p_st 14.47123
hp_mmu-mir-375_st 14.4223
mmu-miR-465c-3p_st 17.90993
mmu-miR-465a-3p_st 18.87058
mmu-miR-196a_st 16.7964

Total number of rows: 688

Table truncated, full table size 18 Kbytes.

Supplementary file Size Download File type/resource
GSM6706772_iBAT.CEL.gz 641.5 Kb (ftp)(http) CEL
Processed data included within Sample table

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