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Sample GSM6706774 Query DataSets for GSM6706774
Status Public on Aug 13, 2023
Title visceral white adipose tissue
Sample type RNA
Source name visceral white adipose tissue
Organism Mus
Characteristics genotype: C57BL/6
Treatment protocol No treatment
Growth protocol 8-week-old male C57BL/6J mices are raised under room temperature
Extracted molecule total RNA
Extraction protocol Total RNA from each pooled sample was isolated using the TRIzol method for Affymetrix miRNA microarray analysis.
Label biotin
Label protocol Procedures were performed as described on the web site of CapitalBio.
Hybridization protocol Biotin-labelled miRNAs were used for hybridization on each miRNA microarray chip containing probes in triplicate.
Scan protocol standard Affymetrix protocol
Description visceral white adipose tissue from C57BL/6 mouse housed at room temperature
Data processing Raw data were normalized to U6 and analysed using GenePix Pro 4.0 software
Submission date Nov 03, 2022
Last update date Aug 13, 2023
Contact name Xiaohong Jiang
Organization name Nanjing University
Street address 163 Xianlin Rd.
City Nanjing
ZIP/Postal code 210000
Country China
Platform ID GPL14613
Series (1)
GSE217222 miRNA expression from mouse adipose tissues

Data table header descriptions
VALUE normalized signal

Data table
hp_mmu-mir-200c_st 3277.132
hp_mmu-mir-200a_st 317.399
hp_mmu-mir-205_st 430.5953
hp_mmu-mir-470_st 368.5406
hp_mmu-mir-743a_st 318.1994
hp_mmu-mir-34c_st 708.6345
hp_mmu-mir-200b_st 247.618
hp_mmu-mir-429_st 272.7464
mmu-miR-878-3p_st 203.806
mmu-miR-202-3p_st 160.3045
mmu-miR-34c-star_st 312.9957
hp_mmu-mir-31_st 436.2685
hp_mmu-mir-449a_st 127.6221
mmu-miR-34b-3p_st 211.0938
hp_mmu-mir-741_st 142.048
mmu-miR-465b-3p_st 112.1484
hp_mmu-mir-375_st 108.5655
mmu-miR-465c-3p_st 134.4678
mmu-miR-465a-3p_st 120.505
mmu-miR-196a_st 105.3238

Total number of rows: 688

Table truncated, full table size 18 Kbytes.

Supplementary file Size Download File type/resource
GSM6706774_viscWAT.CEL.gz 664.4 Kb (ftp)(http) CEL
Processed data included within Sample table

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