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Sample GSM72257 Query DataSets for GSM72257
Status Public on Mar 01, 2006
Title Med13-2
Sample type genomic
 
Source name Med13-2
Organism Schizosaccharomyces pombe
Characteristics Med13-TAP distribution on chr2 and 3.
Extracted molecule genomic DNA
Label Biotin
 
Description IgG beads were used for ChIP of chromatin extracts from Med13-TAP cells. Cell cultures were then grown to mid logarithmic growth phase (5 x106 cells/ml) in rich medium before fixation and ChIP. The resulting ChIP DNA and WCE were labeled with biotin.
Data processing IP/WCE
 
Submission date Aug 26, 2005
Last update date Dec 27, 2005
Contact name Claes M Gustafsson
E-mail(s) claes.gustafsson@medkem.gu.se
Organization name Gothenburg University
Department Department of Medical biochemistry and cell biology
Street address Medcinaregatan 9A
City Gothenburg
ZIP/Postal code 405 30
Country Sweden
 
Platform ID GPL2795
Series (1)
GSE3213 Genome-wide occupancy profile of mediator and the srb8-11 module reveals interactions with coding regions.

Data table header descriptions
ID_REF
VALUE nomarized IP/WCE Med13 value

Data table
ID_REF VALUE
2-0_at 0.814
2-1000_at 0.753
2-10000_at 0.578
2-100000_at 0.519
2-1000000_at 0.894
2-1000250_at 0.714
2-1000500_at 0.576
2-1000750_at 0.295
2-1001000_at 0.759
2-1001250_at 0.772
2-1001500_at 2.601
2-1001750_at 1.298
2-1002000_at 1.589
2-1002250_at 1.495
2-100250_at 0.479
2-1002500_at 0.965
2-1002750_at 1
2-1003000_at 0.387
2-1003250_at 1.264
2-1003500_at 1.928

Total number of rows: 23061

Table truncated, full table size 417 Kbytes.




Supplementary data files not provided

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