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Sample GSM7247373 Query DataSets for GSM7247373
Status Public on Apr 30, 2023
Title Histone ChIP-seq from gastrocnemius (ENCLB605ROF)
Sample type SRA
 
Source name Mus musculus strain B6CASTF1/J female adult (2 months) gastrocnemius tissue
Organism Mus musculus
Characteristics antibody: H3K4me3
tissue_type: gastrocnemius
biomaterial_type: tissue
biosample encode accession: ENCBS703UIG (SAMN34251818)
note: Bernstein pool F of 2 gastrocnemius biosamples
Sex: female
dev stage: adult
age: 2 month
donor_id: ENCDO509HIY
lab: Barbara Wold, Caltech
source: The Jackson Laboratory
link: ENCBS703UIG at ENCODE; https://www.encodeproject.org/ENCBS703UIG/
link: derived from ENCODE donor ENCDO509HIY; https://www.encodeproject.org/ENCDO509HIY/
Extracted molecule genomic DNA
Extraction protocol general protocol: https://www.encodeproject.org/documents/75bad2f5-a924-40fe-9c48-ed322649bc31/@@download/attachment/Epigenomics%20Frozen%20Tissue%20for%20ChIP%20Protocol%20Using%20the%20Covaris%20Hammer%20v2.4.pdf
 
Library strategy ChIP-Seq
Library source genomic
Library selection ChIP
Instrument model Illumina NextSeq 500
 
Description https://www.encodeproject.org/experiments/ENCSR283HPZ/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR283HPZ
assay title: Histone ChIP-seq
assembly: mm10
possible controls: ENCSR820CZJ
encode release date: 2022-07-21
lab: Bradley Bernstein, Broad
library encode accession: ENCLB605ROF
size range: 200-600
Data processing See GSM*_README.txt supplementary file linked below
 
Submission date Apr 28, 2023
Last update date May 02, 2023
Contact name ENCODE DCC
E-mail(s) encode-help@lists.stanford.edu
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
 
Platform ID GPL19057
Series (1)
GSE230954 Histone ChIP-seq from gastrocnemius (ENCSR283HPZ)
Relations
BioSample SAMN34251818
SRA SRX20149347

Supplementary file Size Download File type/resource
GSM7247373_ENCLB605ROF_README.txt.gz 1.0 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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