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Sample GSM729823 Query DataSets for GSM729823
Status Public on Jan 01, 2012
Title CSL7323
Sample type RNA
 
Source name 78A_CSL7323_10009_Adt_F_neoplasia_1_2
Organism Zalophus californianus
Characteristics tissue: Blood
gender: Female
developmental stage: Adult
preliminary diagnosis: Outgroup
Treatment protocol Blood was collected from the caudal gluteal vein into PAXgene tubes from California sea lions (Zalophus californianus) in rehabilitation at the Marine Mammal Center, Sausalito, CA.
Extracted molecule total RNA
Extraction protocol Total RNA extracted with PAXgene Blood RNA kit
Label Cy3
Label protocol Agilent Quick Amp Labeling Kit, one-color, 500 ng RNA input Quick Amp Labeling Kit, one-color 500ng input
 
Hybridization protocol 17 hrs, 60 degrees C according to Agilent protocol in Agilent recommended hyb oven
Scan protocol Agilent B Scanner
Description Outgroup
Data processing Agilent Feature Extraction, Rosetta Resolver
 
Submission date May 24, 2011
Last update date Jan 01, 2012
Contact name Annalaura Mancia
E-mail(s) annalaura.mancia@unife.it
Organization name University of Ferrara
Department Life Sciences and Biotechnology
Street address via L.Borsari, 46
City Ferrara
ZIP/Postal code 44121
Country Italy
 
Platform ID GPL13637
Series (1)
GSE29497 Health Status, Infection and Disease in California Sea Lions (Zalophus californianus) studied using a canine microarray platform and machine-learning approaches

Data table header descriptions
ID_REF
VALUE processed Cy3 signal intensity (Agilent gProcessedSignal)

Data table
ID_REF VALUE
1 3.778459e+005
2 1.924116e+001
3 2.447300e+000
4 4.596734e+000
5 6.333072e+000
6 7.466517e+001
7 2.242222e+001
8 2.110605e+002
9 1.076329e+002
10 9.376824e+001
11 2.824304e+003
12 2.765821e+005
13 6.708867e+001
14 7.396970e+001
15 8.858931e+001
16 4.034240e+002
17 2.669239e+002
18 2.369674e+001
19 8.596872e+001
20 1.095087e+003

Total number of rows: 15743

Table truncated, full table size 296 Kbytes.




Supplementary file Size Download File type/resource
GSM729823.txt.gz 3.0 Mb (ftp)(http) TXT
Processed data included within Sample table
Processed data are available on Series record

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