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Sample GSM73366 Query DataSets for GSM73366
Status Public on Dec 01, 2005
Title AML_INV(16)_LIB3
Sample type SAGE
Anchor NlaIII
Tag Count 83577
Tag Length 10
 
Source name bone marrow, CD15+ myeloid progenitor cells
Organism Homo sapiens
Characteristics Acute Myeoloid Leukemia (AML) patient sample with chromosomal inversion INV(16)
Extracted molecule total RNA
 
Description SAGE analysis of gene expression in leukemic myeloid progenitor cells isolated from bone marrow
 
Submission date Sep 06, 2005
Last update date Nov 19, 2008
Contact name San Ming Wang
E-mail(s) swang1@northwestern.edu
Phone 224-364-7491
Fax 224-364-5003
Organization name ENH Research Institute, Northwestern University
Department Center for Functional Genomics
Street address 1001 University Place
City Evanston
State/province IL
ZIP/Postal code 60062
Country USA
 
Platform ID GPL4
Series (1)
GSE3255 Gene Expression Profiles with Common Translocations in Acute Myeloid Leukemia (AML) using SAGE

Data table header descriptions
TAG Ten-base SAGE tag
COUNT Absolute tag count
TPM tags per million

Data table
TAG COUNT TPM
AAAGCGGCCG 2472 29577.52
AAGCGGCCGC 1251 14968.23
TCTAAAGCGG 1119 13388.85
GTGAAACCCC 1034 12371.82
CCACTGCACT 935 11187.29
CTAAAGCGGC 848 10146.33
CTCATAAGGA 804 9619.87
CCTGTAATCC 796 9524.15
CCCATCGTCC 743 8890.01
AAGACAGTGG 641 7669.57
GTGAAACCCT 543 6497.00
GTGACCACGG 501 5994.47
GGATTTGGCC 456 5456.05
ATTTGAGAAG 414 4953.52
GCAAGCCAAC 407 4869.76
CACCTAATTG 404 4833.87
ACTAACACCC 379 4534.74
ACGCAGGGAG 359 4295.44
CCATTGCACT 332 3972.38
ATAATTCTTT 313 3745.05

Total number of rows: 27880

Table truncated, full table size 519 Kbytes.




Supplementary data files not provided

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