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GEO accession:
Sample GSM73371
Query DataSets for GSM73371
Status
Public on Dec 01, 2005
Title
AML_t(8;21)_LIB3
Sample type
SAGE
Anchor
NlaIII
Tag Count
50067
Tag Length
10
Source name
bone marrow, CD15+ myeloid progenitor cells
Organism
Homo sapiens
Characteristics
Acute Myeoloid Leukemia (AML) patient sample with chromosomal translocation t(8;21)
Extracted molecule
total RNA
Description
SAGE analysis of gene expression in leukemic myeloid progenitor cells isolated from bone marrow
Submission date
Sep 06, 2005
Last update date
Nov 19, 2008
Contact name
San Ming Wang
E-mail(s)
swang1@northwestern.edu
Phone
224-364-7491
Fax
224-364-5003
Organization name
ENH Research Institute, Northwestern University
Department
Center for Functional Genomics
Street address
1001 University Place
City
Evanston
State/province
IL
ZIP/Postal code
60062
Country
USA
Platform ID
GPL4
Series (1)
GSE3255
Gene Expression Profiles with Common Translocations in Acute Myeloid Leukemia (AML) using SAGE
Data table header descriptions
TAG
Ten-base SAGE tag
COUNT
Absolute tag count
TPM
tags per million
Data table
TAG
COUNT
TPM
AAGCGGCCGC
3000
59919.71
AAAGCGGCCG
1484
29640.28
CCCATCGTCC
1446
28881.30
CCCAACGCGC
810
16178.32
TCCAAAGCGG
772
15419.34
GCAAGAAAGT
589
11764.24
CGCCGCCGGC
558
11145.07
CCACTGCACT
546
10905.39
CCCGTCCGGA
447
8928.04
ATGCAGAGCT
441
8808.20
GCTGTTGCGC
407
8129.11
GCAAGCCAAC
377
7529.91
GCGACGAGGC
363
7250.28
GCAGCCATCC
353
7050.55
TCAAGCGGCC
338
6750.95
CCCCAGCCAG
322
6431.38
GCCGTGTCCG
288
5752.29
GTGAAACCCC
263
5252.96
GGATTTGGCC
255
5093.18
GGCAAGCCCC
234
4673.74
Total number of rows:
13729
Table truncated, full table size
256 Kbytes
.
Supplementary data files not provided
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